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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00308
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00308
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-91
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.66 | 34.0 | 3.39e-01 | 70.3% | 45.0% |
| 2xgvA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.66 | 47.0 | 3.83e-01 | 74.3% | 83.5% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.66 | 46.0 | 4.27e-01 | 74.3% | 94.8% |
| 3kk4A01 | 1.10.3990.20 | Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 | 0.61 | 48.0 | 4.29e-01 | 86.5% | 92.7% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.59 | 40.0 | 3.36e-01 | 70.3% | 65.7% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 38.0 | 3.07e-01 | 74.3% | 52.9% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 3.16e-01 | 79.7% | 77.6% |
| 2lxeA01 | 1.10.8.850 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Histone-lysine N methyltransferase , C-terminal domain-like | 0.54 | 37.0 | 3.85e-01 | 74.3% | 76.8% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 41.0 | 3.38e-01 | 89.2% | 97.1% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 36.0 | 3.00e-01 | 79.7% | 56.2% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.50 | 43.0 | 3.70e-01 | 91.9% | 69.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250474 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.60 | 43.0 | 3.29e-01 | 75.7% | 37.3% |
| 3431509 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 41.0 | 3.19e-01 | 74.3% | 55.7% |
| 5061423 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 46.0 | 3.08e-01 | 91.9% | 52.2% |
| 4091699 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.55 | 38.0 | 3.48e-01 | 71.6% | 64.0% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 32.0 | 3.37e-01 | 73.0% | 64.6% |
| 4981961 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.53 | 43.0 | 3.46e-01 | 94.6% | 67.5% |
| 4336179 | 3322.1.1.1 ↗ | alpha bundles › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta › FAS_N | 0.52 | 43.0 | 3.61e-01 | 91.9% | 95.4% |
| 3587660 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.51 | 38.0 | 3.14e-01 | 81.1% | 47.9% |
| 224284 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.50 | 36.0 | 3.35e-01 | 75.7% | 69.9% |
| 3988217 | 241.12.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like | 0.50 | 42.0 | 3.20e-01 | 98.6% | 56.5% |