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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00343
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00343
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-112
Domain cluster:
rep: IMGVR_UViG_3300006398_000342-3300006398-Ga0079067_10172802__D20-113
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 39.0 | 3.46e-01 | 84.8% | 39.3% |
| 6w0pB01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.61 | 51.0 | 3.67e-01 | 88.6% | 52.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.60 | 34.0 | 3.83e-01 | 91.4% | 71.2% |
| 1sqjB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 47.0 | 3.14e-01 | 87.6% | 71.9% |
| 2qz5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 41.0 | 3.62e-01 | 76.2% | 90.1% |
| 4da5A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 42.0 | 4.63e-01 | 80.0% | 100.0% |
| 1f1sA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 36.0 | 4.02e-01 | 88.6% | 84.1% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 3.81e-01 | 81.0% | 89.5% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 3.27e-01 | 94.3% | 91.6% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.52 | 44.0 | 4.48e-01 | 93.3% | 100.0% |
| 2gu1A02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 4.42e-01 | 100.0% | 94.2% |
| 2aj7A00 | 2.30.290.10 | Mainly Beta › Roll › BH3618-like › BH3618-like | 0.51 | 40.0 | 3.54e-01 | 83.8% | 56.7% |
| 2zbwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 35.0 | 3.36e-01 | 70.5% | 95.9% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.07e-01 | 92.4% | 56.5% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.50 | 37.0 | 3.79e-01 | 78.1% | 90.4% |
| 4uu4A00 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.50 | 45.0 | 4.11e-01 | 100.0% | 86.7% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 42.0 | 3.03e-01 | 93.3% | 53.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.71 | 34.0 | 4.15e-01 | 79.0% | 70.0% |
| 5043802 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 39.0 | 3.81e-01 | 83.8% | 50.4% |
| 3940929 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 44.0 | 2.95e-01 | 78.1% | 18.7% |
| 1405147 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.62 | 43.0 | 4.07e-01 | 71.4% | 86.6% |
| 3264765 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.62 | 49.0 | 3.57e-01 | 84.8% | 100.0% |
| 4308195 | 71.1.1.1 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin | 0.62 | 38.0 | 3.11e-01 | 95.2% | 34.2% |
| 3508717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 35.0 | 4.21e-01 | 99.0% | 87.1% |
| 4621260 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 47.0 | 4.42e-01 | 86.7% | 79.2% |
| 3438374 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 46.0 | 3.20e-01 | 100.0% | 25.3% |
| 3576498 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 43.0 | 4.74e-01 | 81.9% | 100.0% |
| 4028363 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 41.0 | 4.41e-01 | 95.2% | 88.9% |
| 4960626 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.56 | 40.0 | 3.62e-01 | 73.3% | 77.7% |
| 3979569 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 40.0 | 3.93e-01 | 89.5% | 70.0% |
| 3381541 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 41.0 | 3.14e-01 | 78.1% | 86.8% |
| 3676329 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.55 | 46.0 | 3.43e-01 | 92.4% | 67.9% |
| 3505097 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 31.0 | 3.45e-01 | 79.0% | 69.4% |
| 3592467 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 31.0 | 3.59e-01 | 88.6% | 78.7% |
| 3622582 | 243.1.1.41 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 | 0.54 | 44.0 | 4.34e-01 | 89.5% | 81.7% |
| 3498504 | 5.1.4.301 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 44.0 | 2.96e-01 | 88.6% | 80.9% |
| 3717497 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 29.0 | 3.64e-01 | 75.2% | 87.5% |
| 4970213 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 3.00e-01 | 87.6% | 83.6% |
| 3512943 | 5.1.3.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 | 0.52 | 44.0 | 3.05e-01 | 90.5% | 57.7% |
| 3825573 | 5.1.5.184 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR11_2nd | 0.51 | 45.0 | 3.00e-01 | 96.2% | 69.0% |
| 3486202 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 44.0 | 2.86e-01 | 92.4% | 59.1% |
| 4176645 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.51 | 41.0 | 3.37e-01 | 85.7% | 71.4% |
D2
high
residues 129-181
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.66 | 56.0 | 3.54e-01 | 98.1% | 36.0% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.56 | 35.0 | 3.12e-01 | 90.6% | 43.4% |