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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00364
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00364
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-136
D2
high
residues 137-239
Domain cluster:
rep: rifcsplowo2_12_scaffold_23_prodigal-single.1__X__X__00276__D65-155
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.80 | 61.0 | 5.66e-01 | 100.0% | 65.6% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 56.0 | 5.20e-01 | 88.3% | 59.5% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.75 | 56.0 | 4.98e-01 | 92.2% | 56.0% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.71 | 58.0 | 5.17e-01 | 86.4% | 77.3% |
| 2z84A00 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.69 | 57.0 | 4.40e-01 | 87.4% | 48.6% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.68 | 45.0 | 4.13e-01 | 89.3% | 52.2% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.66 | 42.0 | 4.50e-01 | 86.4% | 73.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 35.0 | 4.26e-01 | 73.8% | 81.2% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.66 | 39.0 | 4.79e-01 | 77.7% | 100.0% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 36.0 | 4.46e-01 | 73.8% | 88.9% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.65 | 42.0 | 4.93e-01 | 79.6% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 36.0 | 4.11e-01 | 79.6% | 78.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.62 | 51.0 | 4.16e-01 | 87.4% | 53.7% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 50.0 | 4.10e-01 | 86.4% | 55.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.62 | 33.0 | 4.31e-01 | 82.5% | 100.0% |
| 1wjqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 38.0 | 4.33e-01 | 71.8% | 83.3% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 34.0 | 4.40e-01 | 75.7% | 100.0% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 53.0 | 4.12e-01 | 95.1% | 59.8% |
| 4w79A00 | 3.10.620.10 | Alpha Beta › Roll › C8orf32 fold › Protein N-terminal glutamine amidohydrolase, alpha beta roll | 0.58 | 47.0 | 3.80e-01 | 89.3% | 69.8% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.25e-01 | 76.7% | 86.7% |
| 4usoA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 41.0 | 3.74e-01 | 75.7% | 100.0% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 41.0 | 4.07e-01 | 79.6% | 75.9% |
| 2d9vA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.80e-01 | 72.8% | 87.0% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.54 | 36.0 | 3.59e-01 | 81.6% | 65.1% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 44.0 | 3.49e-01 | 91.3% | 93.2% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 45.0 | 3.77e-01 | 93.2% | 89.3% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.53 | 45.0 | 3.63e-01 | 93.2% | 86.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.01e-01 | 78.6% | 85.4% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.52 | 41.0 | 3.55e-01 | 86.4% | 67.9% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 3.31e-01 | 71.8% | 97.7% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.66e-01 | 89.3% | 97.4% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.51 | 32.0 | 3.29e-01 | 81.6% | 64.1% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 38.0 | 3.90e-01 | 79.6% | 97.0% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.84e-01 | 89.3% | 86.2% |
| 5jm6A02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.50 | 42.0 | 3.80e-01 | 91.3% | 100.0% |
| 1wjsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 38.0 | 3.58e-01 | 80.6% | 70.1% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.79 | 67.0 | 5.46e-01 | 91.3% | 54.6% |
| 3278994 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.78 | 65.0 | 5.44e-01 | 89.3% | 61.8% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.77 | 63.0 | 5.52e-01 | 86.4% | 59.3% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.77 | 58.0 | 5.22e-01 | 92.2% | 58.6% |
| 4023279 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 62.0 | 5.19e-01 | 89.3% | 59.4% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 37.0 | 4.08e-01 | 77.7% | 64.7% |
| 3973655 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.67 | 53.0 | 4.21e-01 | 84.5% | 49.8% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 42.0 | 5.07e-01 | 81.6% | 100.0% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 37.0 | 3.98e-01 | 78.6% | 64.4% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 39.0 | 4.38e-01 | 81.6% | 77.5% |
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.52e-01 | 79.6% | 81.2% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 34.0 | 4.48e-01 | 74.8% | 96.4% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 35.0 | 4.56e-01 | 77.7% | 100.0% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 35.0 | 3.93e-01 | 78.6% | 68.8% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.64 | 44.0 | 5.00e-01 | 84.5% | 98.6% |
| 4625654 | 4.1.1.445 ↗ | beta barrels › SH3 › SH3 › SH3 › Spore_GerQ | 0.64 | 42.0 | 4.79e-01 | 81.6% | 92.0% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.63 | 35.0 | 4.47e-01 | 77.7% | 93.3% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 34.0 | 4.43e-01 | 78.6% | 98.2% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 45.0 | 4.36e-01 | 79.6% | 66.1% |
| 3570399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 40.0 | 4.75e-01 | 76.7% | 100.0% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 5.03e-01 | 84.5% | 100.0% |
| 3927363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 31.0 | 4.26e-01 | 70.9% | 98.0% |
| 3217770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 40.0 | 4.11e-01 | 71.8% | 67.0% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.62 | 47.0 | 4.69e-01 | 95.1% | 75.5% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 36.0 | 4.34e-01 | 77.7% | 89.2% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.62 | 35.0 | 4.11e-01 | 77.7% | 80.0% |
| 3587259 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.62 | 44.0 | 4.70e-01 | 84.5% | 84.4% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 35.0 | 3.74e-01 | 78.6% | 63.3% |
| 3547106 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 39.0 | 4.14e-01 | 80.6% | 72.2% |
| 3765274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.10e-01 | 80.6% | 72.2% |
| 3456496 | 4.1.1.75 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhS | 0.60 | 36.0 | 3.46e-01 | 78.6% | 52.2% |
| 3541241 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.60 | 33.0 | 4.10e-01 | 70.9% | 90.0% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 36.0 | 4.36e-01 | 79.6% | 100.0% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.60 | 44.0 | 4.93e-01 | 84.5% | 100.0% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 35.0 | 3.79e-01 | 80.6% | 66.7% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.60 | 32.0 | 3.92e-01 | 83.5% | 83.1% |
| 3474715 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 35.0 | 4.30e-01 | 89.3% | 93.8% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 36.0 | 3.97e-01 | 80.6% | 74.1% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 37.0 | 4.33e-01 | 75.7% | 94.3% |
| 4282868 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 39.0 | 4.48e-01 | 83.5% | 98.6% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 37.0 | 3.63e-01 | 82.5% | 59.1% |
| 4024290 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 3.78e-01 | 75.7% | 86.9% |
| 3587906 | 4.1.1.46 ↗ | beta barrels › SH3 › SH3 › SH3 › VEG | 0.58 | 42.0 | 4.67e-01 | 83.5% | 98.8% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 37.0 | 3.93e-01 | 78.6% | 73.3% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 35.0 | 3.80e-01 | 80.6% | 72.9% |
| 3893808 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.56 | 42.0 | 2.96e-01 | 77.7% | 31.9% |
| 4856373 | 219.1.1.47 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Nt_Gln_amidase | 0.56 | 46.0 | 3.72e-01 | 90.3% | 70.3% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.56 | 40.0 | 3.59e-01 | 74.8% | 93.8% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.55 | 33.0 | 3.95e-01 | 70.9% | 88.6% |
| 3802925 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.55 | 38.0 | 4.20e-01 | 70.9% | 98.8% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 37.0 | 4.09e-01 | 77.7% | 88.7% |
| 4968082 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 44.0 | 3.44e-01 | 86.4% | 86.0% |
| 3925549 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.80e-01 | 85.4% | 74.0% |
| 3244430 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 39.0 | 3.90e-01 | 98.1% | 74.3% |
| 5084081 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.53 | 43.0 | 3.46e-01 | 86.4% | 88.7% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 36.0 | 3.22e-01 | 93.2% | 49.3% |
| 3576219 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.52 | 41.0 | 3.65e-01 | 83.5% | 66.2% |
| 1759628 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.51 | 38.0 | 3.01e-01 | 78.6% | 41.0% |
| 3718903 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.51 | 44.0 | 3.03e-01 | 98.1% | 41.0% |
| 3889853 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.51 | 38.0 | 3.73e-01 | 79.6% | 82.6% |
| 138887 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.51 | 36.0 | 3.53e-01 | 84.5% | 65.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 34.0 | 3.62e-01 | 97.1% | 81.2% |
| 3261235 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 36.0 | 3.88e-01 | 98.1% | 90.6% |
| 3881117 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 40.0 | 4.04e-01 | 84.5% | 94.0% |