←Back to structures
GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00398
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00398
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-80
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.68 | 48.0 | 5.06e-01 | 100.0% | 85.0% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.66 | 49.0 | 4.47e-01 | 100.0% | 59.8% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.64 | 45.0 | 4.07e-01 | 100.0% | 54.3% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 47.0 | 4.66e-01 | 100.0% | 78.9% |
| 2byfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 42.0 | 3.67e-01 | 100.0% | 45.8% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 46.0 | 4.41e-01 | 100.0% | 70.9% |
| 6jptA00 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.59 | 38.0 | 3.15e-01 | 88.4% | 37.2% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.58 | 39.0 | 3.10e-01 | 100.0% | 29.3% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.57 | 39.0 | 4.52e-01 | 98.6% | 100.0% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.56 | 44.0 | 3.23e-01 | 88.4% | 39.7% |
| 3qfwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.56 | 49.0 | 4.35e-01 | 100.0% | 92.2% |
| 6we5A00 | 3.90.80.10 | Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase | 0.56 | 49.0 | 3.51e-01 | 100.0% | 35.4% |
| 1iuhA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.54 | 47.0 | 3.51e-01 | 100.0% | 87.4% |
| 4hwnA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.11e-01 | 100.0% | 47.1% |
| 5uaoC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.57e-01 | 91.3% | 34.0% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 38.0 | 3.40e-01 | 100.0% | 52.4% |
| 7bv5D01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 41.0 | 3.17e-01 | 100.0% | 38.0% |
| 2ijaA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.51 | 42.0 | 2.93e-01 | 100.0% | 37.7% |
| 2khaA01 | 2.60.40.2140 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-glucan-recognition protein, N-terminal domain | 0.51 | 38.0 | 3.42e-01 | 100.0% | 56.4% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 44.0 | 3.85e-01 | 100.0% | 100.0% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 37.0 | 4.10e-01 | 98.6% | 100.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3852865 | 2492.1.1.23 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 | 0.68 | 51.0 | 3.79e-01 | 100.0% | 30.8% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.67 | 46.0 | 4.51e-01 | 100.0% | 66.7% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 45.0 | 4.63e-01 | 100.0% | 80.0% |
| 3593924 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.63 | 49.0 | 4.10e-01 | 100.0% | 49.2% |
| 4026251 | 2492.1.1.8 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 | 0.62 | 48.0 | 3.55e-01 | 100.0% | 31.1% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.62 | 47.0 | 4.64e-01 | 100.0% | 77.3% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.62 | 40.0 | 4.55e-01 | 100.0% | 93.9% |
| 4886584 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.60 | 40.0 | 3.99e-01 | 100.0% | 67.1% |
| 4642338 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.60 | 43.0 | 4.76e-01 | 98.6% | 98.1% |
| 3411669 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 3.89e-01 | 100.0% | 52.7% |
| 4029036 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 47.0 | 4.40e-01 | 100.0% | 71.1% |
| 3606122 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 49.0 | 4.33e-01 | 100.0% | 97.1% |
| 3392698 | 304.151.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Receptor_IA-2 | 0.56 | 51.0 | 4.64e-01 | 100.0% | 100.0% |
| 3735620 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 48.0 | 3.80e-01 | 97.1% | 58.6% |
| 3291916 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.56 | 44.0 | 2.89e-01 | 100.0% | 19.0% |
| 4030574 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.54 | 37.0 | 3.51e-01 | 100.0% | 59.5% |
| 4027417 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 45.0 | 4.50e-01 | 100.0% | 92.9% |
| 2794885 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.53 | 36.0 | 3.75e-01 | 100.0% | 76.6% |
| 148141 | 4076.2.1.1 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH | 0.53 | 31.0 | 3.05e-01 | 98.6% | 50.0% |
| 4945638 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 32.0 | 3.04e-01 | 100.0% | 45.6% |
| 4029586 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.52 | 45.0 | 3.59e-01 | 100.0% | 72.7% |
| 4209732 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 46.0 | 4.15e-01 | 100.0% | 93.7% |
| 3787712 | 3333.1.1.0 ↗ | a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 | 0.52 | 45.0 | 3.54e-01 | 100.0% | 48.7% |
| 3623001 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.52 | 43.0 | 4.18e-01 | 100.0% | 96.2% |
| 3317848 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 43.0 | 2.84e-01 | 100.0% | 23.5% |
| 4364667 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.51 | 44.0 | 3.71e-01 | 100.0% | 64.2% |
| 5013199 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 3.39e-01 | 98.6% | 55.2% |