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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00455

Bact-Vir

GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00455

Identity

Kingdom:
phage

Quality

81.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 92-150_182-215_227-306
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14239.12 best RRXRR 27.5 3.80e-06 34.1% 32.2%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.76 59.0 6.02e-01 79.8% 94.0%
1kcfB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.76 60.0 5.40e-01 81.5% 80.7%
3wxmB02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.71 50.0 5.83e-01 81.5% 100.0%
3bzcA03 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.71 51.0 5.86e-01 79.8% 100.0%
3r8eA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 54.0 5.98e-01 79.8% 100.0%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.70 54.0 4.88e-01 79.8% 89.4%
3n4pC00 3.30.420.320 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › DNA-packaging terminase, C-terminal nuclease domain 0.70 59.0 5.43e-01 89.0% 91.3%
2ychA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.69 54.0 5.66e-01 80.9% 99.4%
3agkA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.67 47.0 5.49e-01 80.3% 100.0%
3zeuB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 50.0 5.10e-01 79.8% 86.6%
3wuhB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 51.0 5.13e-01 81.5% 82.9%
1sazA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 46.0 4.36e-01 71.1% 99.0%
1sazA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 50.0 5.04e-01 79.8% 82.4%
3thxB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.65 54.0 5.70e-01 90.2% 98.7%
2ivnA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 49.0 5.03e-01 79.8% 83.3%
2vlbC00 3.40.50.12500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 45.0 4.12e-01 83.2% 95.8%
3pdiA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.57 40.0 4.29e-01 78.6% 81.2%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.56 46.0 4.50e-01 86.1% 98.4%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 26.0 3.65e-01 83.8% 89.4%
8gtyA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.56 40.0 4.07e-01 74.0% 90.2%
2wteA01 3.40.50.11700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 39.0 4.28e-01 87.9% 89.1%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 44.0 4.04e-01 82.7% 80.4%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 44.0 4.21e-01 82.7% 100.0%
1t6cA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.55 43.0 4.32e-01 82.7% 96.7%
2rbgA00 3.40.50.11100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 38.0 4.33e-01 88.4% 99.2%
2ph7A02 3.40.50.10670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain 0.54 29.0 3.64e-01 80.3% 89.6%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 39.0 3.95e-01 82.7% 73.0%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 38.0 4.23e-01 90.2% 97.7%
3svtA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 41.0 3.53e-01 80.9% 83.9%
1xhcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 31.0 3.69e-01 95.4% 84.7%
1suiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 3.35e-01 70.5% 93.8%
8d89A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 43.0 3.37e-01 88.4% 88.5%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 4.03e-01 82.7% 98.4%
4c0hA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 3.74e-01 85.5% 78.3%
1e8cB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.51 36.0 3.95e-01 78.6% 88.0%
1tq8A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 34.0 3.87e-01 91.3% 92.9%
1edzA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.50 33.0 3.67e-01 99.4% 85.5%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999907 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.96 94.0 7.71e-01 100.0% 78.9%
4998772 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.93 81.0 8.35e-01 89.0% 98.2%
5075804 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.91 88.0 8.62e-01 100.0% 97.3%
4995978 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.90 63.0 7.21e-01 87.3% 91.1%
4996735 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.90 88.0 8.65e-01 100.0% 98.3%
4998327 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.86 68.0 7.56e-01 90.2% 99.3%
4998775 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.82 66.0 7.29e-01 90.2% 98.6%
4229239 2484.1.1.85 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III 0.82 71.0 6.27e-01 89.6% 97.0%
4976249 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.82 53.0 6.53e-01 79.8% 99.1%
3386057 2484.1.1.85 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC_III 0.80 69.0 6.09e-01 89.0% 99.1%
5042784 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.78 51.0 6.03e-01 82.7% 94.2%
4069907 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.78 61.0 6.18e-01 80.9% 92.9%
4610182 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.78 60.0 5.83e-01 79.8% 81.1%
4638438 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 60.0 6.31e-01 80.9% 98.1%
4414942 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 60.0 6.30e-01 80.9% 96.9%
4962902 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 44.0 5.79e-01 79.2% 99.0%
4106513 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 60.0 6.13e-01 80.9% 91.2%
4571749 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.77 60.0 6.17e-01 80.3% 93.3%
3588093 2484.1.1.144 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.76 54.0 6.06e-01 78.6% 93.3%
4938348 2484.1.1.25 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.74 59.0 6.06e-01 82.1% 97.6%
4264624 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.74 57.0 4.40e-01 80.3% 93.0%
4984720 2484.1.1.333 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 0.73 58.0 4.42e-01 82.1% 90.8%
4029485 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.73 57.0 4.18e-01 81.5% 90.2%
5041103 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 49.0 5.74e-01 81.5% 98.3%
4229028 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.72 53.0 4.20e-01 75.7% 100.0%
4425543 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.71 47.0 5.48e-01 81.5% 92.8%
4929295 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 55.0 6.04e-01 90.2% 97.9%
5036730 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 48.0 5.66e-01 80.9% 99.2%
5070445 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.70 47.0 5.51e-01 79.8% 96.7%
3591129 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.70 55.0 4.41e-01 81.5% 91.9%
5029775 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.70 48.0 5.61e-01 82.7% 97.6%
4410634 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 54.0 5.24e-01 80.3% 95.3%
4939492 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.69 48.0 5.60e-01 82.1% 98.4%
3288652 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.69 54.0 5.57e-01 81.5% 89.1%
4564088 2484.1.1.38 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.68 48.0 5.61e-01 82.1% 100.0%
5055458 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.68 50.0 5.66e-01 80.3% 100.0%
4107955 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.68 52.0 4.18e-01 79.8% 94.0%
4391834 2484.1.1.40 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.68 52.0 5.71e-01 80.9% 97.2%
5033346 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 46.0 5.32e-01 81.5% 95.2%
4536448 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 46.0 5.36e-01 82.1% 98.3%
5052862 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 43.0 5.21e-01 83.2% 98.3%
4093695 2484.1.1.48 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.66 53.0 5.70e-01 90.8% 96.7%
4969626 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 46.0 5.25e-01 81.5% 96.8%
3599915 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 52.0 4.98e-01 83.2% 77.5%
4233313 2484.1.1.10 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.63 48.0 5.03e-01 79.8% 91.3%
4129628 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 49.0 4.93e-01 82.1% 98.3%
3520192 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 49.0 4.86e-01 82.1% 93.9%
4595117 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 48.0 5.19e-01 82.1% 97.3%
4669171 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.61 52.0 4.52e-01 90.2% 82.2%
5053105 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 50.0 5.12e-01 87.9% 89.4%
3927914 2484.1.1.212 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.60 43.0 4.85e-01 74.0% 95.6%
3510735 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.59 43.0 4.87e-01 90.2% 96.3%
4952835 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.59 42.0 4.32e-01 73.4% 91.8%
3672945 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 44.0 4.01e-01 81.5% 100.0%
3467205 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.56 49.0 3.57e-01 94.8% 100.0%
5018295 2484.1.1.49 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.56 44.0 4.81e-01 82.1% 100.0%
5002665 2484.1.1.29 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.56 45.0 4.49e-01 83.8% 92.0%
4051753 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.55 24.0 3.33e-01 80.3% 78.9%
3805242 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.54 49.0 3.47e-01 97.7% 84.7%
4937502 2008.1.1.96 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RmuC 0.54 33.0 3.59e-01 90.8% 71.0%
2845073 2484.1.1.29 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.54 42.0 4.35e-01 82.1% 97.6%
3908854 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.54 48.0 3.46e-01 95.4% 87.5%
4946571 2008.1.1.85 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII 0.53 36.0 3.47e-01 78.6% 57.6%
3860326 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.53 47.0 4.27e-01 94.8% 99.6%
3679012 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 45.0 3.83e-01 90.2% 86.4%
3388151 2484.1.1.29 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA 0.53 42.0 4.27e-01 82.7% 97.6%
3457175 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 44.0 3.88e-01 91.9% 96.2%
4928867 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.51 41.0 4.15e-01 97.1% 86.5%
4286836 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.50 40.0 3.77e-01 83.2% 77.1%
D2 high residues 332-391
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.75 61.0 5.16e-01 86.7% 68.4%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 59.0 5.66e-01 86.7% 88.6%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 6.14e-01 90.0% 96.8%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.65e-01 95.0% 87.1%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.72 55.0 5.69e-01 81.7% 100.0%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.82e-01 81.7% 100.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.54e-01 80.0% 91.1%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 52.0 5.29e-01 78.3% 100.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.01e-01 91.7% 85.4%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.12e-01 95.0% 65.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.62e-01 83.3% 100.0%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 52.0 5.01e-01 81.7% 98.5%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.26e-01 75.0% 100.0%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.68 58.0 5.49e-01 96.7% 93.2%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.45e-01 83.3% 100.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.68 59.0 5.45e-01 96.7% 94.8%
1qxmA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.67 53.0 4.07e-01 88.3% 99.3%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.67 54.0 4.20e-01 93.3% 99.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 4.88e-01 81.7% 86.8%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 4.58e-01 80.0% 81.3%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 50.0 4.72e-01 85.0% 82.7%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 46.0 4.25e-01 78.3% 71.2%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 51.0 4.16e-01 95.0% 52.0%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.63 49.0 4.24e-01 96.7% 53.5%
1mbmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 42.0 4.00e-01 70.0% 58.3%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 4.79e-01 95.0% 98.6%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.62 52.0 3.78e-01 93.3% 90.6%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.74e-01 88.3% 89.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.48e-01 80.0% 96.8%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 41.0 3.95e-01 76.7% 60.6%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.40e-01 86.7% 67.5%
7lt2A01 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.60 41.0 2.77e-01 73.3% 21.6%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 41.0 3.61e-01 73.3% 80.2%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.59 47.0 3.69e-01 91.7% 98.6%
2gzbB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 45.0 3.42e-01 88.3% 98.8%
1pwaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 47.0 3.89e-01 96.7% 100.0%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 3.40e-01 91.7% 37.2%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 43.0 3.78e-01 88.3% 55.6%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.54 41.0 2.99e-01 85.0% 31.5%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 39.0 3.53e-01 83.3% 71.8%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.41e-01 95.0% 92.7%
8in8C01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 34.0 2.37e-01 70.0% 85.5%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.52 36.0 3.60e-01 86.7% 72.6%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.79e-01 100.0% 35.3%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 39.0 3.41e-01 91.7% 99.0%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 39.0 2.77e-01 91.7% 96.8%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998148 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.96 84.0 8.76e-01 93.3% 100.0%
5075805 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 75.0 7.86e-01 93.3% 100.0%
4116754 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.81 58.0 6.61e-01 80.0% 100.0%
3537417 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 6.27e-01 78.3% 100.0%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.77 66.0 5.40e-01 95.0% 99.1%
4680376 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.76 60.0 6.24e-01 88.3% 90.9%
3837995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 62.0 6.43e-01 86.7% 94.5%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.76 60.0 5.87e-01 88.3% 78.5%
3821920 4.1.1.283 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.75 58.0 6.07e-01 83.3% 98.2%
3256498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 60.0 6.28e-01 86.7% 98.2%
1557343 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.75 59.0 5.66e-01 86.7% 88.6%
4023868 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.74 64.0 4.71e-01 95.0% 47.7%
3658643 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 60.0 4.48e-01 88.3% 45.5%
3323558 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.74 55.0 5.58e-01 80.0% 100.0%
3245045 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.73 60.0 4.12e-01 88.3% 28.5%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.73 58.0 5.66e-01 85.0% 81.5%
3467678 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 4.92e-01 90.0% 60.9%
3706087 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 6.14e-01 91.7% 96.7%
3486326 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 57.0 5.93e-01 83.3% 98.2%
3835464 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.57e-01 86.7% 75.7%
3937266 4.1.1.414 beta barrels › SH3 › SH3 › SH3 › BPL_LplA_LipB 0.73 49.0 3.02e-01 70.0% 43.2%
4516378 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 59.0 5.65e-01 88.3% 75.7%
3877938 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 63.0 5.45e-01 95.0% 68.9%
3264806 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.95e-01 81.7% 98.0%
3514906 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 64.0 4.41e-01 96.7% 32.1%
3365104 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.72 57.0 5.57e-01 85.0% 96.9%
4547406 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.72 62.0 5.63e-01 95.0% 83.7%
3936474 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.28e-01 95.0% 69.5%
3821751 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.71 63.0 5.69e-01 98.3% 90.0%
4965523 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.81e-01 88.3% 100.0%
3395948 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.71 56.0 5.82e-01 85.0% 98.2%
3475919 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.71 62.0 3.90e-01 100.0% 42.2%
3592541 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 5.56e-01 95.0% 93.8%
3707347 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.74e-01 85.0% 94.5%
4579331 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.66e-01 88.3% 84.1%
4024913 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.49e-01 91.7% 83.1%
3535298 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 60.0 5.25e-01 95.0% 70.0%
5036498 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.70 59.0 5.48e-01 91.7% 78.7%
3684646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.53e-01 96.7% 88.7%
3951961 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.70 60.0 5.15e-01 96.7% 78.9%
4335575 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 60.0 3.29e-01 96.7% 8.2%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 53.0 5.31e-01 81.7% 100.0%
3588979 4.1.1.137 beta barrels › SH3 › SH3 › SH3 › PcrA_UvrD_tudor 0.69 54.0 5.52e-01 85.0% 93.2%
3617175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.26e-01 80.0% 90.9%
3508441 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 60.0 5.15e-01 96.7% 68.4%
3744277 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 50.0 5.40e-01 76.7% 96.0%
3274551 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 56.0 5.21e-01 88.3% 81.3%
3401559 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 55.0 5.36e-01 88.3% 100.0%
4000403 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.69 52.0 5.54e-01 86.7% 100.0%
3296864 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.68 57.0 5.77e-01 91.7% 98.3%
3781329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 4.70e-01 81.7% 66.3%
3936430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.39e-01 96.7% 77.5%
3816553 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.67 50.0 5.17e-01 80.0% 94.5%
3407848 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 57.0 4.88e-01 95.0% 61.1%
4962603 4.26.1.9 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › CPxCG_zf 0.65 44.0 4.94e-01 70.0% 100.0%
3519597 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 56.0 4.83e-01 96.7% 70.5%
3198505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.15e-01 100.0% 89.0%
3517377 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 51.0 4.70e-01 96.7% 72.9%
3512419 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 49.0 4.42e-01 85.0% 76.5%
3407820 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 52.0 4.72e-01 96.7% 71.8%
3628131 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 52.0 4.47e-01 96.7% 64.0%
3263031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.76e-01 88.3% 92.3%
3291157 219.1.1.8 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.62 52.0 4.00e-01 95.0% 99.3%
3743973 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 48.0 4.36e-01 83.3% 78.8%
3473704 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.67e-01 96.7% 90.6%
3910607 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 49.0 4.82e-01 91.7% 100.0%
3920103 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 48.0 4.34e-01 91.7% 80.0%
3168104 5.1.5.52 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C 0.61 46.0 2.63e-01 95.0% 7.1%
5002755 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.61 41.0 4.65e-01 70.0% 100.0%
3526953 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 50.0 4.93e-01 90.0% 100.0%
3895159 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.65e-01 83.3% 100.0%
3913687 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 49.0 4.40e-01 96.7% 70.0%
145704 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.59 46.0 4.66e-01 93.3% 93.1%
4111597 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 44.0 4.32e-01 88.3% 75.4%
4459065 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 46.0 4.20e-01 95.0% 67.8%
3330259 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.56 41.0 2.76e-01 83.3% 31.1%
3609378 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 45.0 3.97e-01 93.3% 82.1%
3432241 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.56 42.0 3.75e-01 83.3% 81.1%
3453664 66.1.1.1 beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.55 43.0 3.27e-01 86.7% 60.0%
3926623 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.51 40.0 3.81e-01 95.0% 75.3%
3622643 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.51 37.0 3.37e-01 80.0% 80.0%