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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00547
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00547
Identity
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-44_186-224
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a8xA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 43.0 | 4.22e-01 | 100.0% | 87.5% |
D2
high
residues 52-178
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 39.0 | 3.88e-01 | 89.0% | 62.1% |
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.57 | 34.0 | 3.25e-01 | 99.2% | 48.1% |
| 1e6vB02 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.55 | 44.0 | 3.45e-01 | 86.6% | 96.9% |
| 3bijB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.12e-01 | 77.2% | 96.2% |
| 2x3fA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.51 | 35.0 | 3.95e-01 | 92.1% | 90.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997795 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.60 | 39.0 | 4.73e-01 | 83.5% | 100.0% |
| 3732468 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.57 | 42.0 | 3.23e-01 | 75.6% | 96.9% |
| 3919431 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 44.0 | 3.26e-01 | 83.5% | 72.9% |
| 3531626 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.56 | 44.0 | 3.67e-01 | 82.7% | 84.3% |
| 3479146 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 43.0 | 3.91e-01 | 82.7% | 98.9% |
| 2485687 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.54 | 33.0 | 3.99e-01 | 83.5% | 92.9% |
| 4983317 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 44.0 | 4.76e-01 | 94.5% | 100.0% |
| 2448205 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 42.0 | 3.80e-01 | 81.9% | 81.2% |
| 3882993 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.53 | 39.0 | 3.73e-01 | 76.4% | 76.0% |
| 4943503 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 39.0 | 4.37e-01 | 88.2% | 100.0% |
| 4025461 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.51 | 34.0 | 3.87e-01 | 88.2% | 90.5% |