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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00089
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00089
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-79
Domain cluster:
rep: rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00058__D11-76
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vpdA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 44.0 | 3.83e-01 | 96.2% | 57.3% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.52 | 40.0 | 3.67e-01 | 83.5% | 82.2% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.50 | 30.0 | 3.23e-01 | 91.1% | 70.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279737 | 564.1.1.4 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › RskA_N | 0.61 | 38.0 | 4.26e-01 | 87.3% | 83.3% |
| 3464898 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.60 | 39.0 | 4.34e-01 | 72.2% | 92.7% |
| 4125194 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.55 | 40.0 | 4.09e-01 | 78.5% | 94.7% |
| 1723359 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.52 | 33.0 | 3.37e-01 | 75.9% | 65.8% |
| 4241236 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.50 | 35.0 | 3.56e-01 | 74.7% | 87.5% |