←Back to structures
GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00094
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00094
Identity
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.93 | 63.0 | 5.96e-01 | 70.1% | 88.3% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 58.0 | 4.28e-01 | 76.1% | 82.5% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.79 | 59.0 | 5.03e-01 | 79.1% | 88.5% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 57.0 | 4.14e-01 | 76.1% | 75.1% |
| 2fjcB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 57.0 | 4.23e-01 | 76.1% | 87.8% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 57.0 | 4.28e-01 | 76.1% | 91.9% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.78 | 57.0 | 4.18e-01 | 76.1% | 84.9% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.77 | 55.0 | 3.95e-01 | 74.6% | 66.7% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 55.0 | 4.65e-01 | 76.1% | 83.3% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 55.0 | 4.01e-01 | 76.1% | 78.5% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 64.0 | 5.28e-01 | 92.5% | 60.0% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.74 | 53.0 | 4.39e-01 | 76.1% | 56.0% |
| 4cmyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 54.0 | 3.96e-01 | 76.1% | 79.1% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.73 | 60.0 | 4.30e-01 | 86.6% | 88.4% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 60.0 | 5.40e-01 | 89.6% | 75.6% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 53.0 | 3.43e-01 | 85.1% | 29.9% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 48.0 | 5.25e-01 | 91.0% | 90.9% |
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.67 | 60.0 | 4.69e-01 | 100.0% | 91.5% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.66 | 59.0 | 5.63e-01 | 100.0% | 85.9% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 56.0 | 4.13e-01 | 97.0% | 85.4% |
| 1cokA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.59 | 39.0 | 3.98e-01 | 73.1% | 69.1% |
| 1evsA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 40.0 | 3.07e-01 | 70.1% | 69.3% |
| 4hzdB01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.57 | 49.0 | 3.86e-01 | 94.0% | 74.5% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 41.0 | 3.98e-01 | 79.1% | 74.4% |
| 4s2rQ03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 49.0 | 3.23e-01 | 100.0% | 84.2% |
| 3mg2B01 | 1.10.2090.10 | Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain | 0.54 | 46.0 | 3.60e-01 | 94.0% | 70.1% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 49.0 | 4.72e-01 | 100.0% | 87.0% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.52 | 41.0 | 3.81e-01 | 88.1% | 86.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3384790 | 226.1.1.3 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › Skp1,Skp1_POZ | 0.83 | 62.0 | 4.73e-01 | 79.1% | 74.5% |
| 3798473 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.82 | 62.0 | 5.10e-01 | 79.1% | 90.4% |
| 4027645 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.81 | 60.0 | 5.77e-01 | 77.6% | 100.0% |
| 3408284 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.78 | 60.0 | 4.90e-01 | 80.6% | 91.3% |
| 3594998 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 66.0 | 5.31e-01 | 92.5% | 63.2% |
| 3806344 | 2485.1.1.11 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phosducin | 0.75 | 54.0 | 3.76e-01 | 82.1% | 24.3% |
| 3770274 | 603.1.1.198 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF4716 | 0.73 | 51.0 | 4.51e-01 | 73.1% | 87.4% |
| 3661495 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 59.0 | 4.19e-01 | 91.0% | 79.0% |
| 3934037 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 54.0 | 3.61e-01 | 100.0% | 36.8% |
| 3704304 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.61 | 42.0 | 4.33e-01 | 71.6% | 81.5% |
| 3388765 | 4048.1.1.0 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases | 0.61 | 41.0 | 4.59e-01 | 70.1% | 100.0% |
| 4217270 | 109.4.1.1906 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27371 | 0.61 | 52.0 | 3.53e-01 | 100.0% | 27.6% |
| 3520310 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.60 | 42.0 | 3.90e-01 | 73.1% | 61.2% |