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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00144
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00144
Identity
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-43
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 45.0 | 2.70e-01 | 92.7% | 43.8% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 39.0 | 2.73e-01 | 82.9% | 29.1% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.54 | 43.0 | 2.85e-01 | 100.0% | 60.6% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 37.0 | 2.97e-01 | 75.6% | 58.9% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 2.97e-01 | 75.6% | 64.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214075 | 221.4.1.35 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, PF30669 | 0.61 | 49.0 | 3.05e-01 | 100.0% | 25.7% |
| 3962535 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 3.10e-01 | 75.6% | 58.9% |
| 3967258 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 38.0 | 3.18e-01 | 75.6% | 66.3% |
| 3972217 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 38.0 | 3.07e-01 | 75.6% | 56.7% |
| 3592415 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.54 | 37.0 | 2.87e-01 | 70.7% | 83.0% |
| 3978577 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.54 | 37.0 | 2.96e-01 | 75.6% | 57.9% |
| 5074152 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.54 | 37.0 | 2.44e-01 | 73.2% | 51.7% |
| 4988230 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 37.0 | 2.98e-01 | 75.6% | 58.9% |
| 4102412 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 38.0 | 3.03e-01 | 97.6% | 36.7% |
| 4376463 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.52 | 42.0 | 2.47e-01 | 100.0% | 31.1% |
| 5062870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 37.0 | 2.97e-01 | 78.0% | 55.6% |
| 4462818 | 101.1.2.71 ↗ | alpha arrays › HTH › HTH › winged helix domain › RuvB_C | 0.52 | 36.0 | 2.99e-01 | 78.0% | 86.4% |
| 5015226 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 35.0 | 2.88e-01 | 75.6% | 58.9% |
| 3280201 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 35.0 | 2.86e-01 | 75.6% | 58.9% |