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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00163
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00163
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-132
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00183__D36-131
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.83 | 69.0 | 6.22e-01 | 87.9% | 69.7% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.81 | 66.0 | 5.91e-01 | 86.8% | 67.7% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.80 | 67.0 | 6.44e-01 | 89.0% | 90.1% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 46.0 | 5.28e-01 | 70.3% | 85.3% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 43.0 | 4.86e-01 | 73.6% | 79.7% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 44.0 | 5.17e-01 | 72.5% | 95.2% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.69 | 47.0 | 4.34e-01 | 71.4% | 76.5% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 44.0 | 5.07e-01 | 76.9% | 95.2% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.67 | 49.0 | 4.15e-01 | 75.8% | 89.7% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 4.57e-01 | 71.4% | 97.6% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 5.23e-01 | 92.3% | 100.0% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 5.12e-01 | 92.3% | 98.8% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.62 | 34.0 | 3.47e-01 | 74.7% | 54.4% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.71e-01 | 74.7% | 100.0% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.61 | 46.0 | 4.57e-01 | 80.2% | 100.0% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.87e-01 | 84.6% | 98.6% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 48.0 | 4.10e-01 | 87.9% | 72.3% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 42.0 | 4.76e-01 | 93.4% | 100.0% |
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 3.99e-01 | 74.7% | 69.8% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 51.0 | 4.98e-01 | 95.6% | 100.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.57e-01 | 92.3% | 86.0% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.56 | 49.0 | 4.37e-01 | 96.7% | 80.6% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 3.57e-01 | 81.3% | 94.2% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 40.0 | 3.53e-01 | 78.0% | 74.8% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.51 | 39.0 | 3.24e-01 | 83.5% | 61.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290509 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.90 | 78.0 | 7.86e-01 | 92.3% | 90.0% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.89 | 75.0 | 6.10e-01 | 87.9% | 61.3% |
| 5054196 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.89 | 75.0 | 6.14e-01 | 87.9% | 75.3% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.89 | 75.0 | 6.92e-01 | 87.9% | 80.0% |
| 4952498 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.88 | 71.0 | 6.88e-01 | 83.5% | 92.9% |
| 5010546 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.87 | 73.0 | 6.80e-01 | 87.9% | 90.0% |
| 3176265 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.87 | 74.0 | 6.05e-01 | 89.0% | 63.9% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.87 | 75.0 | 6.38e-01 | 90.1% | 94.2% |
| 4958339 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.87 | 80.0 | 7.40e-01 | 96.7% | 84.5% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.87 | 74.0 | 6.26e-01 | 89.0% | 70.0% |
| 4943011 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.84 | 71.0 | 7.06e-01 | 90.1% | 93.7% |
| 4942673 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.83 | 66.0 | 6.14e-01 | 82.4% | 78.2% |
| 4036705 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.83 | 68.0 | 5.90e-01 | 86.8% | 61.5% |
| 4071971 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.82 | 69.0 | 5.79e-01 | 89.0% | 57.2% |
| 4646593 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.82 | 68.0 | 5.91e-01 | 89.0% | 64.4% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.71 | 46.0 | 5.03e-01 | 75.8% | 80.0% |
| 4218142 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.70 | 47.0 | 4.61e-01 | 74.7% | 63.0% |
| 3274551 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 48.0 | 5.18e-01 | 72.5% | 90.7% |
| 2675860 | 4.1.1.15 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e | 0.67 | 44.0 | 4.06e-01 | 73.6% | 53.5% |
| 3883165 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 51.0 | 4.94e-01 | 81.3% | 92.0% |
| 3936430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 5.36e-01 | 92.3% | 92.5% |
| 3267345 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.65 | 38.0 | 4.71e-01 | 72.5% | 96.4% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.65 | 42.0 | 4.85e-01 | 75.8% | 92.3% |
| 3407827 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 49.0 | 5.10e-01 | 91.2% | 89.4% |
| 3777241 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.13e-01 | 71.4% | 83.6% |
| 3407820 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 50.0 | 5.16e-01 | 92.3% | 90.6% |
| 3519597 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 50.0 | 4.95e-01 | 85.7% | 92.6% |
| 5022448 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 43.0 | 4.64e-01 | 70.3% | 100.0% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 50.0 | 5.20e-01 | 91.2% | 95.3% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 52.0 | 4.61e-01 | 96.7% | 89.3% |
| 3877938 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 48.0 | 4.90e-01 | 85.7% | 93.3% |
| 3787586 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 50.0 | 4.84e-01 | 91.2% | 91.4% |
| 3879068 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 48.0 | 4.97e-01 | 91.2% | 91.8% |
| 3407853 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 49.0 | 5.00e-01 | 90.1% | 90.0% |
| 3218349 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 47.0 | 4.68e-01 | 83.5% | 86.3% |
| 4438733 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.60 | 43.0 | 4.12e-01 | 74.7% | 97.1% |
| 3547093 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 49.0 | 4.98e-01 | 90.1% | 91.1% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 49.0 | 5.01e-01 | 91.2% | 94.4% |
| 3558926 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 47.0 | 4.75e-01 | 85.7% | 91.1% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.59 | 52.0 | 4.43e-01 | 96.7% | 84.5% |
| 3501699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.95e-01 | 86.8% | 97.5% |
| 161350 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.59 | 48.0 | 4.12e-01 | 89.0% | 71.8% |
| 3480351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.57e-01 | 74.7% | 100.0% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 49.0 | 4.75e-01 | 91.2% | 92.0% |
| 3881121 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 48.0 | 4.68e-01 | 91.2% | 83.0% |
| 3391556 | 4.1.1.384 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st | 0.58 | 49.0 | 4.69e-01 | 94.5% | 96.2% |
| 3268226 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.57 | 41.0 | 3.91e-01 | 74.7% | 94.3% |
| 3397845 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.08e-01 | 82.4% | 76.2% |
| 4356983 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 41.0 | 3.88e-01 | 84.6% | 89.1% |
| 5022659 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.51 | 37.0 | 4.07e-01 | 76.9% | 96.0% |
| 1177377 | 10.32.1.34 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Lyase_N | 0.51 | 39.0 | 3.17e-01 | 83.5% | 56.7% |