←Back to structures
GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00211
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00211
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-85
Domain cluster:
rep: NC_020158__YP_007379057.1__HVTV1-152__00151__D4-78
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 49.0 | 5.78e-01 | 95.3% | 100.0% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 46.0 | 4.73e-01 | 98.8% | 78.3% |
| 3dplC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 4.60e-01 | 100.0% | 84.3% |
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.58 | 33.0 | 3.95e-01 | 95.3% | 85.5% |
| 2kobA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 43.0 | 4.25e-01 | 100.0% | 74.2% |
| 3h5aD01 | 3.90.930.70 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.57 | 42.0 | 4.16e-01 | 100.0% | 75.0% |
| 3hsqA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.54 | 36.0 | 3.88e-01 | 96.5% | 85.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 32.0 | 3.39e-01 | 92.9% | 69.3% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.50 | 37.0 | 3.29e-01 | 80.0% | 62.9% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 37.0 | 3.36e-01 | 100.0% | 56.3% |
| 1p50A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.50 | 41.0 | 3.01e-01 | 92.9% | 56.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4531083 | 101.1.1.461 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF29687 | 0.65 | 41.0 | 4.37e-01 | 95.3% | 73.3% |
| 3406422 | 592.2.1.9 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › PP1_inhibitor | 0.62 | 43.0 | 4.40e-01 | 97.6% | 73.8% |
| 5012908 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 38.0 | 2.51e-01 | 97.6% | 15.3% |
| 4994146 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.55 | 41.0 | 3.73e-01 | 90.6% | 56.9% |
| 4945549 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.52 | 41.0 | 3.06e-01 | 85.9% | 60.9% |