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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00409
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00409
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 292-399
Domain cluster:
rep: IMGVR_UViG_3300025584_000284-3300025584-Ga0209774_100031726__D151-252
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24308.2 best | DUF7487 | 83.3 | 3.10e-23 | 93.5% | 43.2% |
D2
medium
residues 9-101
Domain cluster:
rep: NC_041833.1__YP_009590808.1__FDG52_s4gp52__00052__D122-197
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 39.0 | 3.36e-01 | 78.5% | 80.8% |
D3
medium
residues 117-231
Domain cluster:
rep: pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00266__D9-145
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24308.2 best | DUF7487 | 52.6 | 7.90e-14 | 94.8% | 49.5% |
D4
medium
residues 232-291
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24308.2 best | DUF7487 | 47.1 | 3.70e-12 | 100.0% | 26.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.61 | 41.0 | 3.65e-01 | 83.3% | 46.7% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.60 | 36.0 | 3.67e-01 | 71.7% | 61.4% |
| 2h0uA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.56 | 37.0 | 2.68e-01 | 70.0% | 40.8% |
| 1kyoF00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.55 | 37.0 | 3.52e-01 | 83.3% | 56.8% |
| 6ip0A01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.55 | 38.0 | 2.44e-01 | 71.7% | 69.5% |
| 1li5A02 | 1.20.120.640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.51 | 32.0 | 2.82e-01 | 73.3% | 43.7% |
| 2cg5B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.51 | 34.0 | 3.26e-01 | 70.0% | 81.7% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 34.0 | 3.01e-01 | 78.3% | 48.3% |
| 4nnzA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.50 | 43.0 | 3.07e-01 | 100.0% | 61.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4362324 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.66 | 42.0 | 4.14e-01 | 71.7% | 58.5% |
| 3290328 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.57 | 45.0 | 3.79e-01 | 88.3% | 52.4% |
| 3678733 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.54 | 31.0 | 3.03e-01 | 75.0% | 45.7% |