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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00446
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00446
Identity
- Kingdom:
- phage
Quality
91.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-93
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p0uA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.64 | 56.0 | 3.67e-01 | 100.0% | 42.3% |
| 1fnnA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 51.0 | 4.25e-01 | 100.0% | 76.2% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.60 | 50.0 | 4.27e-01 | 94.2% | 91.8% |
| 2ba3A01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.59 | 32.0 | 3.81e-01 | 100.0% | 93.1% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.58 | 44.0 | 3.46e-01 | 84.6% | 41.2% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.56 | 42.0 | 2.95e-01 | 84.6% | 25.1% |
| 1l9lA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.54 | 41.0 | 3.83e-01 | 100.0% | 64.9% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.53 | 38.0 | 3.16e-01 | 100.0% | 38.5% |
| 2qtsA04 | 1.10.287.820 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Acid-sensing ion channel domain | 0.51 | 33.0 | 2.97e-01 | 73.1% | 42.9% |
| 1ekjA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.51 | 36.0 | 2.53e-01 | 82.7% | 47.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3736536 | 3107.1.1.1 ↗ | few secondary structure elements › Amino-terminal Zn-finger of Ube3a ligase (AZUL) › Amino-terminal Zn-finger of Ube3a ligase (AZUL) › Amino-terminal Zn-finger of Ube3a ligase (AZUL) › AZUL | 0.62 | 47.0 | 4.12e-01 | 90.4% | 76.7% |
| 4597624 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.62 | 42.0 | 3.08e-01 | 84.6% | 23.7% |
| 4248927 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 42.0 | 3.24e-01 | 84.6% | 37.6% |
| 3380495 | 7579.1.1.95 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Hydrolase_4 | 0.56 | 48.0 | 3.13e-01 | 100.0% | 49.8% |
| 3282088 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.55 | 45.0 | 3.83e-01 | 100.0% | 57.9% |
| 3971342 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.51 | 42.0 | 4.21e-01 | 96.2% | 94.5% |