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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00472
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00472
Identity
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-32
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jfcA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.95 | 82.0 | 6.66e-01 | 100.0% | 53.6% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.94 | 81.0 | 5.17e-01 | 100.0% | 22.6% |
| 4jvtA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.93 | 80.0 | 7.30e-01 | 100.0% | 73.2% |
| 4og1A02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.93 | 78.0 | 6.34e-01 | 100.0% | 51.7% |
| 4jylA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.91 | 77.0 | 6.65e-01 | 100.0% | 61.2% |
| 4di1C02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.88 | 72.0 | 6.71e-01 | 100.0% | 73.2% |
| 4jcsA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.88 | 73.0 | 5.86e-01 | 100.0% | 48.4% |
| 2hw5A02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.87 | 71.0 | 5.91e-01 | 100.0% | 52.6% |
| 3sllA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.84 | 66.0 | 5.49e-01 | 100.0% | 50.8% |
| 5tw1D01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.82 | 66.0 | 4.29e-01 | 100.0% | 21.2% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.78 | 62.0 | 4.62e-01 | 100.0% | 34.5% |
| 3h5tA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 56.0 | 4.94e-01 | 83.3% | 55.3% |
| 3vtiA07 | 1.10.357.160 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.74 | 56.0 | 3.76e-01 | 100.0% | 21.1% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.71 | 58.0 | 5.53e-01 | 100.0% | 83.8% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.69 | 58.0 | 4.93e-01 | 96.7% | 60.8% |
| 2xzmI00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.69 | 53.0 | 3.60e-01 | 100.0% | 21.7% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.68 | 56.0 | 4.54e-01 | 96.7% | 50.8% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 56.0 | 4.68e-01 | 96.7% | 56.6% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.21e-01 | 100.0% | 70.1% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.66 | 46.0 | 3.67e-01 | 96.7% | 38.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3334855 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.90 | 76.0 | 7.66e-01 | 100.0% | 100.0% |
| 4000134 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.88 | 73.0 | 3.83e-01 | 100.0% | 3.4% |
| 4943264 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.79 | 65.0 | 4.97e-01 | 100.0% | 40.0% |
| 3638386 | 603.1.1.111 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N | 0.79 | 67.0 | 4.62e-01 | 100.0% | 31.4% |
| 3669330 | 604.1.1.148 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N | 0.79 | 64.0 | 4.73e-01 | 96.7% | 35.3% |
| 3512231 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.78 | 60.0 | 5.94e-01 | 100.0% | 85.7% |
| 5065986 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.73 | 58.0 | 4.97e-01 | 100.0% | 63.6% |
| 3973171 | 607.1.1.1 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N | 0.71 | 52.0 | 3.67e-01 | 100.0% | 23.2% |