Back to structures

GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00500

Bact-Vir

GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00500

Identity

Kingdom:
phage

Quality

97.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-59
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xgqb01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.58 33.0 2.82e-01 98.1% 30.1%
7sz2A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 43.0 3.76e-01 100.0% 67.4%
5bpdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.25e-01 92.5% 50.7%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.52 36.0 3.56e-01 94.3% 69.0%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.51 40.0 2.84e-01 86.8% 70.5%
1oyiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 34.0 3.34e-01 92.5% 61.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4019060 109.4.1.1125 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C 0.52 40.0 2.44e-01 88.7% 26.8%