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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00630
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00630
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-83
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 44.0 | 4.72e-01 | 100.0% | 77.5% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 41.0 | 4.12e-01 | 100.0% | 70.4% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 39.0 | 2.63e-01 | 100.0% | 17.1% |
| 2cayB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.73e-01 | 90.1% | 74.0% |
| 1a8dA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 40.0 | 3.00e-01 | 84.0% | 82.5% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 39.0 | 3.81e-01 | 97.5% | 74.4% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.40e-01 | 95.1% | 50.8% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.83e-01 | 100.0% | 82.4% |
| 5bv3D01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.51 | 38.0 | 3.48e-01 | 81.5% | 90.2% |
| 3fc7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 42.0 | 4.02e-01 | 100.0% | 87.0% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 43.0 | 2.88e-01 | 100.0% | 22.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4095696 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.72 | 34.0 | 3.64e-01 | 100.0% | 49.3% |
| 4937737 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 61.0 | 6.01e-01 | 100.0% | 97.6% |
| 4937283 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.67 | 58.0 | 5.56e-01 | 100.0% | 91.5% |
| 3429751 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.63 | 40.0 | 4.46e-01 | 96.3% | 85.0% |
| 4302657 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.62 | 56.0 | 3.93e-01 | 100.0% | 76.4% |
| 3927081 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 40.0 | 2.71e-01 | 76.5% | 16.9% |
| 3970479 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.60 | 46.0 | 4.73e-01 | 81.5% | 98.7% |
| 3821141 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.60 | 41.0 | 2.85e-01 | 100.0% | 19.7% |
| 3603774 | 239.5.1.1 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae | 0.59 | 46.0 | 4.44e-01 | 100.0% | 74.4% |
| 3173729 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.57 | 42.0 | 3.65e-01 | 76.5% | 96.7% |
| None | — | 0.56 | 45.0 | 3.05e-01 | 100.0% | 23.6% | |
| 4919518 | 239.5.1.1 ↗ | beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae | 0.55 | 45.0 | 4.30e-01 | 100.0% | 75.8% |
| None | — | 0.55 | 47.0 | 3.27e-01 | 100.0% | 28.7% | |
| 3679340 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 43.0 | 3.95e-01 | 100.0% | 63.6% |
| 3940587 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 40.0 | 2.73e-01 | 100.0% | 20.6% |
| 3241172 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.54 | 47.0 | 4.23e-01 | 100.0% | 90.4% |
| 4926997 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.53 | 46.0 | 4.27e-01 | 100.0% | 92.4% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.53 | 43.0 | 3.61e-01 | 90.1% | 79.3% |
| 3433328 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 45.0 | 2.89e-01 | 100.0% | 20.3% |
| 4289541 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.52 | 35.0 | 3.62e-01 | 85.2% | 74.7% |
| 3554809 | 5.1.5.77 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR75_1st | 0.52 | 41.0 | 2.77e-01 | 100.0% | 22.2% |
| 4783165 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.51 | 41.0 | 3.31e-01 | 100.0% | 42.9% |
| 3699171 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 41.0 | 2.72e-01 | 88.9% | 59.5% |
| 3785788 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.51 | 45.0 | 2.79e-01 | 100.0% | 18.0% |