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GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00640
Bact-VirGWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00640
Identity
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-102
Domain cluster:
rep: MF360958.1__ASV44183.1__PBI_SCTP2_168__00168__D83-153
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pn0A02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.74 | 50.0 | 5.38e-01 | 100.0% | 81.7% |
| 3doaA03 | 3.40.970.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like | 0.67 | 23.0 | 3.39e-01 | 100.0% | 67.4% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 26.0 | 2.52e-01 | 100.0% | 30.4% |
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.62 | 34.0 | 4.50e-01 | 97.9% | 100.0% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 28.0 | 3.92e-01 | 100.0% | 89.8% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 27.0 | 2.85e-01 | 100.0% | 45.3% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.56 | 29.0 | 3.78e-01 | 100.0% | 90.9% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 28.0 | 2.96e-01 | 100.0% | 53.8% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 27.0 | 3.59e-01 | 100.0% | 92.0% |
| 6su1D01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.52 | 30.0 | 3.17e-01 | 91.8% | 61.1% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 29.0 | 3.22e-01 | 72.2% | 70.5% |
| 4qzvB02 | 2.20.210.30 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.50 | 33.0 | 3.80e-01 | 100.0% | 97.1% |
| 4l3nA02 | 2.20.210.30 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.50 | 33.0 | 3.77e-01 | 100.0% | 97.0% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 30.0 | 2.71e-01 | 100.0% | 40.9% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 38.0 | 2.86e-01 | 80.4% | 49.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 35.0 | 4.76e-01 | 100.0% | 94.0% |
| 4980993 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.65 | 39.0 | 4.12e-01 | 100.0% | 68.2% |
| 3556189 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 35.0 | 3.60e-01 | 91.8% | 60.0% |
| 3208632 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 32.0 | 3.98e-01 | 100.0% | 94.5% |
| 3216375 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 32.0 | 3.43e-01 | 100.0% | 65.9% |
| 3964206 | 284.1.1.7 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_2 | 0.52 | 44.0 | 4.56e-01 | 100.0% | 96.7% |
| 3591524 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 35.0 | 3.06e-01 | 100.0% | 47.3% |