G_gene_product

Euk-Vir

Kotonkan_virus

G_gene_product__YP_006202621__Kotonkan_virus__318836

Identity

70.7 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Ephemerovirus› Kotonkan_virus

TaxID: 318836

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-205

PDB

Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00974.25 best	Rhabdo_glycop_FD	103.1	1.70e-29	74.6%	100.0%

D2 medium residues 20-31_405-483

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3a5zB01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.57	34.0	3.95e-01	98.9%	85.7%
4p16A01	3.10.20.540	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain	0.57	33.0	3.88e-01	95.6%	91.1%
1z9hA02	6.20.200.30	Special › Other non-globular › Defensin A-like ›	0.55	20.0	2.79e-01	85.7%	58.1%
4m4zA01	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.54	29.0	3.77e-01	92.3%	100.0%
4iupA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.53	35.0	3.84e-01	100.0%	84.7%
2k7iA01	3.30.160.160	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like	0.53	25.0	3.35e-01	74.7%	85.4%
1dleB02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.50	42.0	3.64e-01	93.4%	77.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3627688	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.62	41.0	3.50e-01	100.0%	41.3%
4238585	375.1.4.1 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C	0.62	30.0	3.72e-01	86.8%	75.9%
3408330	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.60	40.0	3.89e-01	100.0%	62.0%
3834563	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.56	38.0	4.05e-01	100.0%	80.0%
3302816	4.1.1.235 ↗	beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5	0.52	44.0	3.94e-01	94.5%	74.6%
3710545	64.1.1.0 ↗	beta meanders › WW domain-like › WW domain › WW domain	0.51	36.0	3.89e-01	89.0%	93.3%

D3 medium residues 32-50_346-404

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4f0aB02	3.30.2460.20	Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain	0.55	44.0	4.66e-01	100.0%	100.0%
7emfR01	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.53	41.0	3.26e-01	85.9%	53.1%
1ffyA02	3.90.740.10	Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	0.50	42.0	3.13e-01	94.9%	100.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4372267	868.1.1.2 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase	0.56	38.0	2.62e-01	70.5%	34.8%
3362111	868.1.1.0 ↗	a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related	0.56	43.0	3.27e-01	85.9%	47.0%
3496677	3315.1.1.1 ↗	a+b complex topology › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Glyco_transf_41	0.54	38.0	3.32e-01	100.0%	48.7%
3472406	5.1.12.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains	0.52	43.0	2.97e-01	94.9%	39.3%

D4 medium residues 51-64_211-345_484-513

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24833.2 best	Rhabdo_glycop_CD	30.8	4.10e-07	41.3%	50.4%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1lujB01	1.10.10.490	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT	0.73	18.0	3.61e-01	81.6%	77.4%
4d6wB02	6.10.140.740	Special › Helix non-globular › Helix Hairpins ›	0.67	32.0	4.41e-01	92.2%	88.0%
2etnB01	1.10.287.180	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain	0.56	26.0	3.79e-01	76.5%	100.0%
1pcfA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.52	22.0	3.33e-01	74.3%	100.0%
2yf4F00	1.10.3420.10	Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain	0.52	26.0	2.97e-01	71.5%	60.8%
6mh4A03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.51	20.0	2.86e-01	78.8%	75.9%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3754639	150.5.1.106 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C	0.53	24.0	3.51e-01	84.4%	91.8%
3731064	633.6.1.0 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like	0.51	26.0	3.29e-01	87.2%	80.0%