G_protein

Euk-Vir

Xiburema_virus

G_protein__YP_009094164__Xiburema_virus__1272959

Identity

72.9 mean pLDDT

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Arurhavirus› Xiburema_virus

TaxID: 1272959

View cluster (24 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 152-166_300-395

PDB

Domain cluster: rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4d6wA03	2.30.29.130	Mainly Beta › Roll › PH-domain like ›	0.76	62.0	6.72e-01	99.1%	100.0%
2cmzA03	2.30.29.130	Mainly Beta › Roll › PH-domain like ›	0.73	58.0	6.33e-01	100.0%	100.0%
2k2jA00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.59	49.0	4.85e-01	90.1%	92.3%
1q67A01	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.58	48.0	4.52e-01	92.8%	99.3%
2aehA03	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.56	47.0	4.78e-01	91.9%	97.3%
3hk0B02	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.53	44.0	4.16e-01	91.9%	73.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3718687	220.1.1.175 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_31	0.66	55.0	5.03e-01	92.8%	88.0%
3598658	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.64	54.0	4.86e-01	92.8%	96.2%
3700528	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.61	52.0	5.01e-01	92.8%	87.2%
4162584	220.1.1.67 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3	0.60	51.0	4.56e-01	93.7%	75.0%
3388895	220.1.1.170 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin	0.60	47.0	4.72e-01	91.9%	82.7%
3390227	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.60	50.0	5.16e-01	93.7%	98.1%
5013239	220.1.1.219 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch	0.59	48.0	4.85e-01	87.4%	99.1%
4018741	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.58	49.0	4.08e-01	92.8%	88.5%
4964214	375.8.1.1 ↗	few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B	0.57	25.0	3.36e-01	77.5%	78.2%
3800237	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.56	47.0	4.56e-01	91.9%	85.6%

D2 high residues 171-297

PDB

Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00974.25 best	Rhabdo_glycop_FD	97.4	9.40e-28	78.7%	100.0%

D3 medium residues 440-554

PDB

Domain cluster: rep: glycoprotein__YP_010087312__Muir_Springs_virus__932700__D321-442

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24833.2 best	Rhabdo_glycop_CD	37.0	4.80e-09	66.1%	58.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5tfqA00	3.40.710.10	Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily	0.50	40.0	3.05e-01	86.1%	82.3%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3505725	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	27.0	3.52e-01	80.0%	94.5%
3636807	1.1.5.30 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2	0.54	42.0	3.22e-01	85.2%	92.6%