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G_protein

Euk-Vir

Maize_yellow_striate_virus

G_protein__YP_010086416__Maize_yellow_striate_virus__1168550

Identity

Accession:
YP_010086416 ↗
Protein ID:
G_protein
Kingdom:
euk

Quality

67.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Rhabdoviridae› Betacytorhabdovirus› Maize_yellow_striate_virus

TaxID: 1168550

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-181
PDB
Domain cluster: rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
D2 high residues 307-402
PDB
D3 medium residues 45-59_192-252
PDB
Domain cluster: rep: glycoprotein__YP_009506260__Cacao_swollen_shoot_Togo_A_virus__1960254__D37-59_197-249
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.71 61.0 5.44e-01 96.1% 96.4%
1pwaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.69 60.0 5.14e-01 97.4% 99.2%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 58.0 4.89e-01 94.7% 62.9%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.67 56.0 5.26e-01 93.4% 80.0%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 56.0 4.81e-01 96.1% 85.9%
3pp2A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 56.0 4.99e-01 94.7% 84.8%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 57.0 4.92e-01 96.1% 82.2%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 56.0 4.69e-01 96.1% 68.6%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 55.0 4.59e-01 96.1% 87.9%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 55.0 4.86e-01 96.1% 81.7%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.68e-01 92.1% 69.3%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 52.0 4.81e-01 90.8% 82.0%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.75e-01 93.4% 73.6%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 53.0 4.69e-01 94.7% 77.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 4.61e-01 98.7% 81.2%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 52.0 4.85e-01 89.5% 83.2%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 41.0 4.34e-01 92.1% 75.0%
2cmzA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.62 51.0 4.84e-01 93.4% 81.7%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 51.0 4.62e-01 94.7% 79.8%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.66e-01 93.4% 77.1%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.52e-01 94.7% 80.6%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.26e-01 96.1% 64.9%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 4.55e-01 94.7% 80.8%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 4.37e-01 96.1% 67.6%
3bb6C00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 36.0 3.16e-01 96.1% 41.1%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 46.0 3.85e-01 90.8% 97.8%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.57 42.0 4.53e-01 94.7% 95.2%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 37.0 4.04e-01 92.1% 88.3%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 3.58e-01 94.7% 51.3%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.56 46.0 4.32e-01 92.1% 94.7%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.55 42.0 3.94e-01 86.8% 81.0%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 4.22e-01 90.8% 95.5%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.45e-01 94.7% 52.7%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.53 44.0 4.01e-01 96.1% 72.9%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 38.0 3.15e-01 94.7% 41.3%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 43.0 3.13e-01 94.7% 84.6%
1jiwI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 42.0 3.88e-01 93.4% 89.5%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 42.0 3.90e-01 92.1% 89.0%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 42.0 3.64e-01 94.7% 86.8%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.60e-01 93.4% 96.1%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 37.0 2.93e-01 76.3% 86.8%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.51 42.0 3.83e-01 94.7% 80.6%
2hgaA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 42.0 4.06e-01 92.1% 97.6%
3cloC01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 37.0 2.85e-01 80.3% 83.4%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 37.0 3.06e-01 96.1% 40.4%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.71e-01 92.1% 99.4%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3720028 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 58.0 5.09e-01 94.7% 77.4%
3743938 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 58.0 4.86e-01 96.1% 63.8%
3477104 220.1.1.248 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_32 0.67 57.0 3.84e-01 94.7% 32.2%
3523446 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.67 57.0 5.22e-01 96.1% 84.0%
3417150 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 56.0 4.32e-01 93.4% 60.6%
3867614 220.1.1.34 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.66 56.0 3.43e-01 94.7% 18.4%
3718060 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 57.0 4.99e-01 96.1% 76.5%
3922234 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.91e-01 96.1% 73.0%
3264377 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 55.0 4.80e-01 94.7% 75.0%
4021140 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.86e-01 94.7% 79.1%
3493294 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 4.55e-01 96.1% 56.6%
3935052 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.65 55.0 4.70e-01 96.1% 76.9%
3771406 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 4.71e-01 94.7% 84.0%
3259514 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.78e-01 97.4% 70.0%
3271265 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 53.0 4.62e-01 93.4% 83.3%
3269834 220.1.1.95 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.64 53.0 4.62e-01 96.1% 70.4%
3567875 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 52.0 4.17e-01 93.4% 50.6%
3480564 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.33e-01 94.7% 82.9%
3211867 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 4.67e-01 96.1% 71.8%
3594856 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.59e-01 96.1% 71.8%
3712139 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.60 49.0 4.47e-01 94.7% 70.9%
3177726 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 52.0 3.99e-01 100.0% 93.5%
3713703 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.43e-01 96.1% 72.2%
3417244 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.60 49.0 4.59e-01 92.1% 77.9%
3504834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 39.0 4.26e-01 93.4% 91.4%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 37.0 3.98e-01 92.1% 76.9%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.30e-01 98.7% 82.9%
3594081 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.06e-01 94.7% 77.5%
3517452 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 42.0 3.27e-01 82.9% 55.2%
3715569 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.44e-01 94.7% 43.1%
3336357 3794.1.1.4 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCCA_BT 0.54 45.0 3.58e-01 94.7% 60.0%
3240679 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 46.0 3.58e-01 97.4% 45.0%
3499649 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.52 43.0 4.07e-01 94.7% 76.7%
3201755 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.52 44.0 3.52e-01 98.7% 61.8%
5033892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.96e-01 97.4% 92.3%
4483985 9.7.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh 0.52 40.0 3.87e-01 88.2% 98.9%
3617732 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.52 41.0 2.62e-01 88.2% 18.5%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 4.09e-01 97.4% 85.1%
3269764 5.1.4.258 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.51 39.0 2.52e-01 84.2% 40.2%
3476221 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.51 41.0 2.58e-01 93.4% 14.8%
3537702 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 41.0 3.44e-01 90.8% 80.0%
5050109 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.51 37.0 3.58e-01 82.9% 69.4%
3931783 1.1.7.41 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.51 36.0 3.41e-01 92.1% 61.1%
3979749 5.1.3.18 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SdiA-regulated 0.50 42.0 3.04e-01 97.4% 99.6%
5046498 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.50 44.0 3.42e-01 97.4% 93.3%
3636368 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.50 42.0 3.53e-01 96.1% 70.0%
4963504 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 34.0 3.25e-01 96.1% 58.9%
D4 medium residues 253-306
PDB