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Glutamate_dehydrogenase

Euk-Vir

Pandoravirus_quercus

Glutamate_dehydrogenase__YP_009483260__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009483260 ↗
Protein ID:
Glutamate_dehydrogenase
Kingdom:
euk

Quality

60.5 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_quercus

TaxID: 2107709

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-145
PDB
D2 medium residues 146-214
PDB
D3 medium residues 215-290_310-417
PDB
Domain cluster: rep: CAKLQF020000025.1__CAH1092138.1__SAMEA5780031_03497__00034__D228-392_442-454
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00208.28 best ELFV_dehydrog 55.3 1.10e-14 97.3% 60.3%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aoeC03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 61.0 6.78e-01 93.5% 92.7%
3aogA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.80 62.0 6.80e-01 93.5% 94.8%
5gudA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 63.0 6.70e-01 93.5% 95.1%
1bgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 64.0 6.69e-01 93.5% 95.2%
7ecrA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 65.0 6.60e-01 92.4% 95.6%
3al2A02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.73 34.0 4.64e-01 98.9% 83.5%
1hwyA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 63.0 5.30e-01 99.5% 83.1%
2yfkA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.65 44.0 4.40e-01 100.0% 66.7%
4jc8A01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.64 41.0 4.71e-01 93.5% 87.5%
7w6bA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.64 56.0 4.92e-01 95.1% 100.0%
2m1xA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.63 45.0 4.82e-01 95.7% 83.7%
7tbvA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 49.0 5.33e-01 95.1% 96.8%
8sp0A01 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.63 45.0 4.84e-01 95.7% 87.0%
2csuA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.62 50.0 5.24e-01 97.8% 92.8%
3e48A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 52.0 5.25e-01 95.7% 89.1%
3dfzB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 39.0 4.64e-01 96.7% 93.6%
4xymC03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.60 48.0 5.00e-01 98.4% 90.5%
3iupA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 48.0 4.80e-01 97.3% 81.9%
3c5vA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 53.0 4.53e-01 96.7% 85.0%
3slkA01 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 44.0 4.49e-01 100.0% 79.7%
2p4hX00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 53.0 4.43e-01 96.7% 72.9%
3fniA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 45.0 4.88e-01 96.2% 94.8%
3v3tA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.59 53.0 5.16e-01 97.8% 97.1%
4jgbB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 53.0 5.09e-01 96.7% 95.1%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 52.0 4.44e-01 96.7% 68.5%
3ruiA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 54.0 4.39e-01 100.0% 68.6%
3zidB00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.58 52.0 4.25e-01 98.4% 57.6%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 52.0 4.50e-01 97.8% 92.9%
3gvxA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 48.0 4.93e-01 97.3% 91.0%
4mcjG00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 45.0 4.86e-01 98.9% 98.7%
2ejbA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.57 49.0 5.07e-01 98.4% 96.6%
3e0xA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 52.0 4.69e-01 98.4% 95.5%
7wm5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 47.0 4.53e-01 99.5% 77.8%
4rheC00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.56 51.0 5.00e-01 98.4% 94.0%
1lj8A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.36e-01 96.7% 87.7%
3wnvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.95e-01 97.8% 90.8%
2jh3A02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 35.0 4.12e-01 93.5% 91.9%
4g2nA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 5.01e-01 98.9% 94.0%
4x9xA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 39.0 4.27e-01 97.3% 87.9%
2qyoA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 4.31e-01 99.5% 67.9%
3sftA00 3.40.50.180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylesterase CheB, C-terminal domain 0.55 49.0 4.94e-01 96.2% 98.9%
3p7zA01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.55 38.0 4.10e-01 90.8% 81.1%
2qm0A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 51.0 4.58e-01 98.9% 90.8%
1s3iA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.55 49.0 4.77e-01 95.7% 90.2%
1y8qC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 51.0 4.24e-01 100.0% 88.1%
1y8qB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.74e-01 100.0% 82.4%
4rwzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 4.64e-01 94.6% 86.2%
5ceeA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 51.0 4.69e-01 100.0% 83.2%
4dgsA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 4.52e-01 95.1% 94.2%
1vypX00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 49.0 3.96e-01 100.0% 83.1%
5f4bA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.54 46.0 4.79e-01 96.7% 98.8%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.87e-01 98.4% 98.4%
5aj3K00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.53 33.0 3.80e-01 91.3% 84.6%
1dljA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 4.56e-01 96.2% 88.2%
3mq2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 4.47e-01 96.7% 87.4%
4ed9A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.52 48.0 4.12e-01 98.9% 65.4%
1ipaA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.52 40.0 4.34e-01 96.7% 95.4%
1wohA00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.52 43.0 3.67e-01 88.6% 92.1%
4necC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 4.46e-01 99.5% 84.0%
1xdwA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 48.0 4.73e-01 98.9% 92.4%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.51 42.0 4.04e-01 88.0% 93.6%
2xtmA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 47.0 4.50e-01 98.9% 89.9%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 43.0 4.15e-01 91.8% 96.6%
2d1fA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 43.0 3.88e-01 91.8% 71.3%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4985203 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.81 60.0 6.66e-01 88.0% 92.7%
4966014 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.77 63.0 6.83e-01 96.2% 100.0%
4934634 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.74 70.0 6.17e-01 99.5% 77.6%
4231124 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.73 67.0 5.33e-01 97.3% 95.4%
5049597 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.70 67.0 5.51e-01 99.5% 85.2%
4945868 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.70 66.0 5.90e-01 99.5% 84.8%
3977098 2003.1.1.43 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_3 0.70 62.0 6.44e-01 97.3% 98.3%
3969555 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.70 66.0 5.90e-01 99.5% 84.5%
98277 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.69 65.0 5.95e-01 99.5% 80.9%
3682720 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.69 65.0 5.51e-01 99.5% 83.4%
4989770 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.69 66.0 5.87e-01 99.5% 79.6%
4319625 2003.1.8.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like 0.69 40.0 5.11e-01 100.0% 95.5%
4475585 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.69 64.0 5.19e-01 98.4% 93.0%
4981207 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.69 65.0 5.90e-01 99.5% 79.6%
4936577 2007.1.3.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.68 47.0 5.38e-01 98.4% 94.8%
4100025 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.68 65.0 5.80e-01 99.5% 79.2%
2641598 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.68 64.0 5.83e-01 99.5% 79.7%
5069181 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.67 64.0 5.92e-01 99.5% 84.9%
5028959 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.67 63.0 5.79e-01 99.5% 79.1%
4931061 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.67 63.0 5.77e-01 99.5% 78.7%
3765101 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.67 63.0 5.21e-01 99.5% 79.5%
4979277 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.67 63.0 5.81e-01 99.5% 81.7%
144525 2003.1.1.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.66 62.0 5.70e-01 99.5% 79.3%
3515070 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.64 36.0 3.84e-01 88.6% 60.6%
3341369 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.63 58.0 4.65e-01 98.4% 64.1%
4425440 2003.1.1.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.62 58.0 4.74e-01 98.4% 68.3%
4458081 2003.1.1.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH,SDH_C 0.62 49.0 4.82e-01 95.1% 75.5%
10020 2007.3.1.6 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.62 50.0 5.27e-01 97.8% 94.5%
3604530 2007.3.1.6 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.62 50.0 5.22e-01 98.4% 93.9%
None — 0.62 48.0 3.85e-01 100.0% 42.6%
4673340 2003.1.5.174 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 0.61 48.0 3.81e-01 100.0% 40.5%
5076178 2007.3.1.6 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.61 50.0 5.11e-01 98.4% 89.7%
3909145 2496.1.1.6 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 0.61 40.0 4.26e-01 96.2% 73.9%
3410655 2004.1.1.222 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RhoGAP_pG1_pG2 0.61 47.0 5.03e-01 98.9% 92.5%
4944764 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.60 49.0 5.08e-01 98.4% 92.3%
4106925 2003.1.5.196 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr 0.60 48.0 3.78e-01 100.0% 40.5%
3598940 2003.6.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.60 55.0 4.54e-01 100.0% 77.0%
4027550 2003.6.1.2 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Carb_kinase 0.60 56.0 4.40e-01 100.0% 83.3%
2754669 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.59 49.0 5.05e-01 97.3% 92.4%
3981925 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.58 35.0 4.10e-01 82.6% 83.8%
3777728 2496.1.1.6 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 0.58 40.0 4.11e-01 89.7% 73.7%
4494958 2007.1.13.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase 0.57 42.0 4.39e-01 100.0% 83.0%
3985938 2484.1.1.194 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.57 35.0 3.43e-01 96.2% 55.4%
3272962 2496.1.1.6 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 0.56 39.0 4.14e-01 89.1% 80.0%
3971375 2484.1.1.194 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.56 34.0 3.45e-01 96.2% 58.0%
4099374 2484.1.1.202 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_2 0.56 35.0 3.59e-01 96.2% 62.9%
5052011 2007.2.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.56 44.0 4.73e-01 96.7% 98.1%
3817679 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.56 52.0 3.70e-01 100.0% 93.7%
3479583 2003.1.9.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.55 51.0 3.59e-01 100.0% 94.7%
4125316 2004.1.1.201 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.54 48.0 4.24e-01 96.7% 96.3%
4180222 2004.1.1.235 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VirC1 0.54 48.0 4.46e-01 96.7% 99.6%
3587844 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 32.0 3.85e-01 95.7% 91.3%
3619563 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 39.0 3.84e-01 74.5% 100.0%
None — 0.53 48.0 4.44e-01 96.7% 99.6%
5026804 2484.1.1.80 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.53 32.0 3.82e-01 96.2% 91.3%
4975717 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.53 45.0 4.68e-01 98.9% 96.6%
2130767 2003.1.5.196 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr 0.53 45.0 3.59e-01 92.4% 45.2%
3992734 7527.1.1.2 ↗ a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 0.53 48.0 3.79e-01 99.5% 49.7%
4371842 2003.1.5.156 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 0.52 45.0 3.51e-01 92.4% 43.5%
3887584 2004.1.1.118 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.52 48.0 3.58e-01 99.5% 40.7%
5035900 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 43.0 4.52e-01 98.4% 95.9%
4552580 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.52 44.0 3.45e-01 90.2% 43.6%
5077198 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 46.0 4.52e-01 98.9% 89.7%
4242917 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.52 44.0 3.51e-01 92.4% 45.0%
4970664 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 30.0 3.56e-01 93.5% 87.0%
5048362 2484.1.1.80 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.51 31.0 3.58e-01 95.7% 84.8%
4971059 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.51 46.0 4.42e-01 100.0% 87.4%
3879061 2004.1.1.118 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.51 46.0 4.24e-01 98.9% 76.2%
4375903 2003.1.5.174 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 0.51 43.0 3.40e-01 92.4% 42.9%
3879370 7529.1.1.1 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.50 41.0 4.04e-01 85.3% 85.1%
5018155 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.50 45.0 4.17e-01 100.0% 85.0%
D4 medium residues 418-480
PDB