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Glycoprotein_H

Euk-Vir

Murid_betaherpesvirus_1

Glycoprotein_H__YP_214078__Murid_betaherpesvirus_1__10366

Identity

Accession:
YP_214078 ↗
Protein ID:
Glycoprotein_H
Kingdom:
euk

Quality

77.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-115
PDB
D2 medium residues 140-156_263-365
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 75.4 5.40e-21 97.5% 21.4%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dlqA02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 48.0 5.35e-01 73.3% 88.4%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.66 44.0 4.95e-01 71.7% 90.1%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 49.0 4.51e-01 82.5% 62.0%
3dyjA02 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.63 47.0 4.37e-01 77.5% 64.2%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.63 42.0 4.20e-01 71.7% 65.1%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.62 44.0 4.28e-01 80.8% 66.4%
3fnbA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.62 45.0 4.59e-01 75.0% 80.7%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 4.11e-01 95.8% 53.5%
4djhA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.59 42.0 3.16e-01 72.5% 80.8%
2imiB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 49.0 4.69e-01 100.0% 76.4%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.59 41.0 3.01e-01 72.5% 73.4%
1wkbA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.58 46.0 4.64e-01 89.2% 82.6%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.58 40.0 3.95e-01 70.8% 69.2%
4im7A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.58 43.0 3.61e-01 77.5% 82.2%
3i5pA03 1.20.120.1880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain 0.57 45.0 3.63e-01 85.8% 62.7%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.57 41.0 3.93e-01 75.0% 71.9%
4i1mB01 1.20.120.1700 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 40.0 3.94e-01 75.0% 68.2%
3u3iA02 1.20.58.1110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 39.0 4.07e-01 70.8% 88.0%
1ezfC00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 50.0 3.67e-01 100.0% 81.2%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 44.0 3.86e-01 85.8% 78.8%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 35.0 4.09e-01 86.7% 91.7%
4f4cA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.54 46.0 2.86e-01 93.3% 93.2%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.54 41.0 4.12e-01 86.7% 77.6%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.54 48.0 4.11e-01 99.2% 81.3%
3kp9A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.53 43.0 3.89e-01 94.2% 64.8%
6vmsR00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 37.0 2.91e-01 74.2% 54.7%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.52 37.0 3.83e-01 87.5% 78.1%
2idgA00 1.10.3480.10 Mainly Alpha › Orthogonal Bundle › TorD-like › TorD-like 0.52 44.0 4.04e-01 93.3% 76.1%
4ib4A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 41.0 3.12e-01 85.8% 67.7%
2i39B00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.51 38.0 3.88e-01 80.0% 82.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2095503 3146.1.1.1 a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.83 79.0 5.01e-01 100.0% 48.1%
3185926 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 58.0 4.33e-01 85.0% 60.9%
3244304 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 54.0 4.17e-01 79.2% 39.2%
3365642 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 56.0 4.58e-01 85.8% 61.3%
3817666 109.4.1.585 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF627 0.70 46.0 3.63e-01 74.2% 32.4%
5063219 109.25.1.15 alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › Cpn60_TCP1 0.69 55.0 5.21e-01 85.8% 89.0%
3347220 601.1.1.51 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › IPGAL1_C 0.69 55.0 4.62e-01 85.0% 67.5%
3926031 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.66 46.0 5.03e-01 71.7% 89.5%
3735368 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.66 50.0 4.36e-01 80.0% 53.9%
5020289 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.65 47.0 3.93e-01 75.0% 51.0%
3917099 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 48.0 4.12e-01 80.8% 49.7%
3245655 101.1.2.552 alpha arrays › HTH › HTH › winged helix domain › eIF-3c_N 0.64 48.0 4.86e-01 80.0% 87.5%
3592870 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 46.0 4.95e-01 81.7% 95.0%
4119921 1128.1.1.23 alpha bundles › LYR protein › LYR protein › LYR protein › Ycf66_N 0.61 40.0 4.48e-01 80.8% 84.0%
3741875 3277.2.1.1 alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.59 38.0 4.25e-01 70.8% 83.9%
3286283 4266.2.1.1 alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 0.59 41.0 4.36e-01 71.7% 82.7%
3903284 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.54 40.0 3.48e-01 77.5% 69.4%
4213215 150.3.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IL6 0.54 36.0 3.22e-01 74.2% 45.1%
5024514 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 37.0 3.50e-01 71.7% 68.3%
3914266 150.3.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine 0.53 42.0 3.83e-01 85.0% 80.6%
310229 5000.3.1.3 alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Poxv_Bcl-2-like 0.51 38.0 3.88e-01 80.0% 82.4%
3246131 192.29.1.93 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › WSN 0.51 41.0 3.92e-01 87.5% 82.8%
3963380 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.50 36.0 3.29e-01 75.8% 92.7%
D3 medium residues 157-262
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 91.8 5.70e-26 97.2% 21.2%
D4 medium residues 366-568
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02489.22 best Herpes_glycop_H 170.4 8.60e-50 87.2% 37.7%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ikhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 36.0 4.49e-01 72.4% 86.6%
2pziA04 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 39.0 4.15e-01 99.5% 70.6%
6ljaA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.61 51.0 4.21e-01 88.7% 83.3%
3au3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 51.0 4.44e-01 90.1% 81.4%
3vwaA03 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 47.0 4.15e-01 95.1% 56.7%
2bb5A01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.59 50.0 4.36e-01 88.7% 74.8%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 51.0 5.04e-01 94.1% 88.2%
1k8kG00 1.25.40.190 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 0.59 34.0 4.00e-01 81.3% 80.6%
4wz9A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.59 48.0 4.14e-01 94.6% 54.3%
7miqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 33.0 4.34e-01 91.1% 100.0%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 29.0 4.02e-01 70.4% 100.0%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 34.0 4.08e-01 84.2% 96.0%
1wkbA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.54 26.0 3.24e-01 75.9% 72.7%
1xqrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 48.0 4.37e-01 96.1% 84.6%
7qx4A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.52 39.0 3.72e-01 81.3% 65.8%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 3.93e-01 92.6% 90.5%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 46.0 4.58e-01 99.0% 96.1%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2095503 3146.1.1.1 a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.79 68.0 4.89e-01 89.7% 73.9%
1554358 3146.1.1.1 a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.74 66.0 4.66e-01 94.6% 75.5%
3272586 109.4.1.162 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.66 58.0 4.28e-01 95.1% 61.5%
4517656 109.4.1.526 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc 0.64 53.0 4.96e-01 88.2% 84.8%
4143412 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 50.0 4.07e-01 82.8% 60.8%
3521311 109.4.1.3048 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, TPR_IMB1, TPR_IPO5 0.63 56.0 3.73e-01 95.1% 29.5%
3899226 109.4.1.2382 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29407 0.63 37.0 4.03e-01 99.5% 68.0%
3495181 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 55.0 5.06e-01 95.6% 94.7%
3592539 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 36.0 4.61e-01 89.2% 100.0%
3193383 109.4.1.108 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CTNNBL 0.60 53.0 3.79e-01 96.1% 45.8%
None 0.59 37.0 3.46e-01 80.3% 50.0%
3640303 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 41.0 4.61e-01 92.6% 90.6%
3849249 109.25.1.0 alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A 0.59 45.0 4.72e-01 92.1% 88.3%
3497847 109.4.1.2736 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Importin_rep_4, Importin_rep_6, TPR_IPO5 0.59 52.0 3.73e-01 95.6% 38.6%
3708355 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 51.0 3.78e-01 94.6% 45.5%
3870728 109.4.1.620 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS22L_N 0.57 46.0 4.75e-01 86.2% 97.9%
4426202 109.4.1.1298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fes1, PF28415 0.55 49.0 4.42e-01 95.6% 75.4%
4081597 109.4.1.1298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fes1, PF28415 0.55 43.0 4.26e-01 94.6% 76.7%
3740042 109.4.1.1298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fes1, PF28415 0.55 48.0 4.28e-01 94.6% 74.4%
3936435 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 46.0 4.15e-01 89.7% 85.0%
3595800 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 4.62e-01 94.6% 91.7%
3419823 109.4.1.1298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fes1, PF28415 0.54 48.0 3.93e-01 95.1% 58.1%
3807852 109.4.1.120 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2 0.54 42.0 4.27e-01 80.3% 85.5%
3634749 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 4.30e-01 92.1% 78.5%
3925111 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 42.0 4.27e-01 82.8% 95.1%
5050695 3352.1.1.15 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 0.52 41.0 3.30e-01 81.8% 77.7%
4977419 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 40.0 4.34e-01 97.0% 100.0%
D5 medium residues 569-694
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17488.8 best Herpes_glycoH_C 129.7 9.10e-38 96.0% 85.1%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7b7nH01 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.85 75.0 7.55e-01 94.4% 91.3%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.83 72.0 7.09e-01 95.2% 85.7%
3m1cA04 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.83 73.0 7.21e-01 96.8% 87.9%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 29.0 4.00e-01 82.5% 85.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 28.0 3.80e-01 86.5% 83.3%
1u7iA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.60 30.0 4.13e-01 88.9% 98.4%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 28.0 2.98e-01 73.8% 54.0%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.52 38.0 3.76e-01 77.8% 84.9%
1rv9A00 3.60.140.10 Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases 0.50 42.0 3.42e-01 91.3% 83.9%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2095502 3145.1.1.1 beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.90 85.0 8.03e-01 98.4% 84.8%
1936537 3145.1.1.1 beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.85 79.0 7.42e-01 97.6% 82.6%
1309233 3145.1.1.1 beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.84 72.0 6.81e-01 95.2% 77.0%
4830885 3145.1.1.1 beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.83 66.0 7.24e-01 84.1% 100.0%
119479 3145.1.1.1 beta sandwiches › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › C-terminal domain of envelope glycoprotein H › Herpes_glycoH_C 0.83 73.0 6.89e-01 96.8% 78.9%
5034252 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.67 31.0 3.08e-01 89.7% 43.1%
4970370 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 28.0 4.14e-01 88.1% 100.0%
3675525 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 32.0 4.21e-01 93.7% 100.0%
3930206 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 4.14e-01 87.3% 93.0%
3797697 9.15.1.0 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 0.52 40.0 3.63e-01 83.3% 100.0%
3920804 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 29.0 3.54e-01 90.5% 94.3%
3615961 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.51 39.0 3.52e-01 81.0% 100.0%
3461175 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 29.0 3.34e-01 74.6% 74.7%