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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00050

Bact-Vir

H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00050

Identity

Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-99
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.76 45.0 3.94e-01 90.8% 40.8%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 37.0 4.79e-01 83.9% 89.6%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 39.0 4.89e-01 93.1% 92.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 39.0 4.86e-01 93.1% 94.1%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 38.0 4.44e-01 88.5% 76.7%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 39.0 4.76e-01 93.1% 88.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 39.0 4.90e-01 93.1% 96.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 38.0 4.19e-01 93.1% 68.1%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 42.0 4.19e-01 100.0% 60.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 36.0 4.59e-01 94.3% 93.8%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 3.72e-01 100.0% 41.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 34.0 4.44e-01 83.9% 91.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 37.0 4.57e-01 93.1% 90.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.67 39.0 3.72e-01 90.8% 50.0%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 3.98e-01 100.0% 51.8%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 39.0 4.45e-01 97.7% 79.7%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 42.0 4.10e-01 100.0% 58.3%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 41.0 4.06e-01 92.0% 58.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 37.0 4.04e-01 96.6% 67.1%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 37.0 4.52e-01 94.3% 92.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 36.0 4.33e-01 94.3% 83.9%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 39.0 4.65e-01 93.1% 91.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.53e-01 70.1% 85.7%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 44.0 3.86e-01 100.0% 48.0%
4c26A00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.65 34.0 3.90e-01 78.2% 68.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 38.0 4.76e-01 93.1% 98.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 4.38e-01 90.8% 70.2%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 43.0 3.78e-01 100.0% 46.5%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.64 40.0 3.60e-01 90.8% 44.7%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 35.0 4.56e-01 85.1% 100.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 39.0 4.77e-01 98.9% 100.0%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 37.0 4.65e-01 87.4% 100.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 37.0 4.32e-01 92.0% 85.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.63 44.0 3.31e-01 90.8% 30.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 37.0 4.23e-01 93.1% 78.8%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 36.0 4.30e-01 96.6% 88.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 41.0 4.35e-01 96.6% 77.2%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 41.0 4.67e-01 92.0% 93.8%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 38.0 4.60e-01 93.1% 98.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.60 38.0 4.23e-01 90.8% 83.3%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.53e-01 90.8% 90.9%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 46.0 3.54e-01 86.2% 82.2%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 4.68e-01 82.8% 100.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.58 37.0 4.15e-01 89.7% 83.6%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 36.0 4.04e-01 93.1% 81.8%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 4.72e-01 85.1% 100.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 4.29e-01 87.4% 96.7%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 4.37e-01 86.2% 98.4%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 36.0 4.29e-01 85.1% 100.0%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.54 44.0 3.44e-01 89.7% 83.6%
5t3oA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 37.0 3.21e-01 72.4% 84.9%
4gi2B01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.53 44.0 3.18e-01 92.0% 93.6%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 37.0 4.22e-01 83.9% 100.0%
2bmbA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.53 45.0 3.18e-01 100.0% 94.4%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.82e-01 73.6% 100.0%
2zbkA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.51 41.0 3.03e-01 88.5% 34.1%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5025079 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 42.0 5.24e-01 89.7% 87.3%
4963650 4.1.1.488 beta barrels › SH3 › SH3 › SH3 › DUF7346 0.76 40.0 4.93e-01 94.3% 81.8%
5058671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 40.0 4.92e-01 90.8% 83.6%
4946165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 41.0 4.97e-01 93.1% 85.5%
4947995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 40.0 4.92e-01 90.8% 85.5%
4952887 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 41.0 5.03e-01 92.0% 89.1%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 46.0 4.87e-01 93.1% 74.7%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 40.0 5.02e-01 94.3% 96.0%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 41.0 4.91e-01 93.1% 89.1%
5017214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 40.0 4.86e-01 90.8% 89.1%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 42.0 4.71e-01 92.0% 78.5%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 42.0 4.79e-01 93.1% 81.5%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 38.0 3.84e-01 93.1% 54.1%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 39.0 4.56e-01 94.3% 80.0%
3541241 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.68 40.0 4.66e-01 94.3% 83.3%
4816818 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 37.0 4.76e-01 92.0% 97.9%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 36.0 4.41e-01 86.2% 81.8%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 37.0 4.52e-01 93.1% 85.2%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 37.0 4.44e-01 95.4% 81.0%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.68 39.0 4.47e-01 98.9% 76.9%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 38.0 4.63e-01 93.1% 87.3%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 40.0 4.73e-01 95.4% 86.7%
3217770 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.32e-01 100.0% 60.0%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.66 41.0 4.73e-01 97.7% 84.6%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 39.0 4.39e-01 93.1% 76.9%
4147056 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 38.0 3.63e-01 96.6% 49.0%
3877485 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 38.0 3.85e-01 96.6% 57.6%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.66 38.0 4.49e-01 94.3% 83.3%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.66 42.0 4.57e-01 72.4% 80.0%
3547106 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 40.0 4.01e-01 96.6% 58.9%
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 38.0 3.84e-01 96.6% 57.6%
3913334 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 38.0 4.20e-01 97.7% 71.4%
4574546 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 39.0 4.34e-01 90.8% 78.5%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 37.0 4.51e-01 96.6% 89.1%
3230083 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 37.0 3.69e-01 96.6% 53.3%
3408327 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 37.0 3.69e-01 96.6% 54.4%
3506279 4.1.1.112 beta barrels › SH3 › SH3 › SH3 › Tudor_1_RapA 0.65 38.0 4.55e-01 95.4% 90.9%
3765274 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 40.0 3.96e-01 96.6% 58.9%
3407089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 38.0 3.95e-01 95.4% 62.5%
4002896 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 37.0 3.73e-01 96.6% 55.6%
3517728 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.64 37.0 4.12e-01 95.4% 71.4%
3920666 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 37.0 3.73e-01 96.6% 55.6%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 37.0 4.50e-01 96.6% 90.9%
3535278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 37.0 4.36e-01 100.0% 83.3%
3576128 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 40.0 3.70e-01 95.4% 47.8%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.44e-01 100.0% 66.0%
3830187 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 36.0 4.42e-01 95.4% 89.1%
3547084 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 37.0 3.74e-01 96.6% 56.7%
3389177 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 37.0 3.55e-01 96.6% 50.0%
3875218 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.64 42.0 4.72e-01 72.4% 90.8%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 37.0 3.79e-01 96.6% 58.8%
3881123 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 37.0 3.76e-01 96.6% 58.8%
4985969 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 39.0 4.60e-01 97.7% 90.0%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 39.0 4.43e-01 93.1% 84.1%
3407854 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 37.0 3.59e-01 96.6% 52.6%
3562168 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 36.0 3.62e-01 96.6% 54.4%
3576438 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 38.0 3.80e-01 96.6% 57.8%
3721794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 38.0 4.48e-01 96.6% 88.3%
3228278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 36.0 4.10e-01 96.6% 75.4%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 37.0 3.70e-01 96.6% 56.7%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 42.0 4.37e-01 100.0% 75.0%
4317035 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 37.0 3.77e-01 96.6% 60.0%
3765289 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 37.0 3.68e-01 96.6% 56.7%
3518844 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 37.0 3.76e-01 96.6% 58.8%
3604145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 40.0 4.62e-01 98.9% 93.3%
3261235 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 38.0 3.88e-01 94.3% 62.4%
3881119 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 37.0 3.83e-01 96.6% 63.7%
3879064 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 36.0 3.60e-01 96.6% 55.6%
5001903 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 39.0 4.35e-01 97.7% 80.0%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.98e-01 97.7% 100.0%
3938389 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 37.0 3.83e-01 96.6% 62.4%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 37.0 4.34e-01 95.4% 88.3%
3999723 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 36.0 3.06e-01 96.6% 34.0%
4953054 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 39.0 4.15e-01 97.7% 74.7%
3402950 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.61 46.0 2.94e-01 81.6% 35.3%
4508244 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.61 46.0 3.18e-01 81.6% 52.1%
1759628 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.60 46.0 3.44e-01 81.6% 71.6%
3584224 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 35.0 3.28e-01 97.7% 46.7%
4404324 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 4.59e-01 92.0% 83.5%
4973749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 38.0 4.18e-01 97.7% 80.0%
4947996 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 36.0 4.33e-01 74.7% 100.0%
4625654 4.1.1.445 beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.57 39.0 4.21e-01 92.0% 82.7%
4945673 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 39.0 4.44e-01 82.8% 100.0%
5037849 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.55 38.0 3.37e-01 97.7% 48.8%
D2 medium residues 103-169
PDB
Domain cluster: representative