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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00057

Bact-Vir

H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00057

Identity

Kingdom:
phage

Quality

78.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.90 70.0 6.43e-01 81.7% 74.2%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.86 67.0 5.84e-01 81.7% 71.8%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.84 65.0 5.67e-01 81.7% 68.0%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.84 63.0 5.80e-01 80.3% 74.7%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.84 64.0 5.61e-01 80.3% 71.0%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.83 63.0 5.68e-01 80.3% 69.8%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.82 59.0 5.04e-01 76.1% 57.7%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.81 60.0 5.77e-01 77.5% 73.8%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.81 62.0 5.78e-01 81.7% 72.7%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.81 62.0 5.31e-01 81.7% 68.8%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.80 62.0 5.47e-01 81.7% 69.0%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.80 62.0 4.91e-01 81.7% 48.2%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.79 40.0 3.26e-01 91.5% 28.6%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.79 58.0 5.26e-01 77.5% 66.7%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.79 60.0 5.11e-01 81.7% 59.6%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 39.0 4.04e-01 97.2% 52.2%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.71 61.0 4.77e-01 94.4% 61.3%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 48.0 4.86e-01 80.3% 75.7%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.67 51.0 3.98e-01 83.1% 56.5%
1xxaC00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.63 48.0 4.76e-01 80.3% 100.0%
2qq6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 47.0 4.01e-01 80.3% 87.1%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 49.0 4.90e-01 88.7% 91.9%
2nwhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 47.0 3.11e-01 84.5% 47.9%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.59 48.0 4.08e-01 94.4% 62.5%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 40.0 2.83e-01 70.4% 27.8%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.58 35.0 3.60e-01 97.2% 60.9%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 44.0 3.71e-01 85.9% 98.5%
4q0yA00 2.60.40.4400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 42.0 3.49e-01 78.9% 94.7%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 45.0 3.16e-01 100.0% 28.6%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 4.34e-01 97.2% 88.2%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.75e-01 83.1% 82.3%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.56 47.0 3.35e-01 100.0% 46.1%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.55 48.0 4.12e-01 100.0% 72.3%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.55 46.0 4.10e-01 95.8% 94.4%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 3.91e-01 98.6% 68.7%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 4.05e-01 95.8% 71.1%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.53 38.0 2.45e-01 77.5% 33.8%
3d7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 34.0 3.34e-01 93.0% 59.3%
4w1vA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 39.0 2.99e-01 78.9% 68.4%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.52 45.0 3.91e-01 98.6% 78.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3498575 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.89 69.0 6.08e-01 81.7% 63.0%
3414272 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.88 67.0 6.00e-01 80.3% 72.6%
3940847 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.87 68.0 5.75e-01 81.7% 60.0%
3264236 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.87 67.0 5.86e-01 80.3% 67.0%
3888556 220.1.1.48 beta barrels › PH domain-like › PH domain-like › PH domain-like › Jak1_Phl 0.85 66.0 4.98e-01 81.7% 56.8%
3887127 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.84 66.0 5.46e-01 83.1% 61.7%
3861121 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.83 65.0 5.38e-01 81.7% 60.9%
3254760 220.1.1.29 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.83 64.0 5.22e-01 81.7% 53.6%
3576021 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.83 64.0 5.15e-01 81.7% 54.6%
3276072 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.83 64.0 5.54e-01 81.7% 59.0%
3797608 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.82 64.0 5.41e-01 81.7% 64.5%
3620293 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.82 62.0 5.02e-01 80.3% 51.5%
3475007 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.82 63.0 5.39e-01 81.7% 63.6%
3271442 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.81 62.0 4.79e-01 81.7% 49.3%
3921879 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.81 63.0 4.77e-01 83.1% 43.8%
3548074 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.80 63.0 5.20e-01 83.1% 65.8%
5081361 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.80 60.0 5.34e-01 80.3% 62.0%
3602759 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.79 59.0 6.32e-01 78.9% 96.7%
3255034 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.78 60.0 4.80e-01 81.7% 50.4%
3625596 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.78 61.0 5.85e-01 83.1% 96.2%
3604468 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.77 52.0 5.04e-01 77.5% 62.5%
4992470 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.77 55.0 5.96e-01 76.1% 90.0%
4276957 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.77 54.0 5.97e-01 80.3% 94.5%
4262261 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.76 54.0 6.07e-01 80.3% 96.4%
3584295 220.1.1.118 beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.75 57.0 4.74e-01 81.7% 55.2%
3973146 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 51.0 5.87e-01 76.1% 100.0%
4307219 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.72 52.0 5.81e-01 80.3% 98.2%
3280386 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 52.0 5.74e-01 80.3% 98.2%
4174179 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.72 48.0 5.56e-01 76.1% 100.0%
4093923 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 49.0 5.39e-01 80.3% 92.7%
3706686 4263.2.1.0 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.70 51.0 5.32e-01 78.9% 86.2%
3290519 220.1.1.116 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF6585 0.69 51.0 4.92e-01 80.3% 75.0%
1413813 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.68 47.0 5.25e-01 78.9% 94.5%
5044987 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 52.0 4.57e-01 83.1% 57.1%
2095506 1170.1.2.6 beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › UL128 0.68 44.0 4.78e-01 74.6% 83.9%
3989261 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 46.0 5.06e-01 80.3% 96.4%
4667150 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.62 52.0 3.71e-01 94.4% 56.8%
3786021 319.1.1.14 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HECT_2 0.62 54.0 4.01e-01 95.8% 54.5%
3233504 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.61 45.0 3.03e-01 81.7% 68.9%
3476810 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.59 45.0 3.08e-01 100.0% 23.2%
146720 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.59 48.0 4.37e-01 94.4% 78.4%
169505 319.1.1.7 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › SHQ1-like_CS 0.58 49.0 4.45e-01 97.2% 94.9%
5037245 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 49.0 3.51e-01 97.2% 72.9%
3498423 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.57 42.0 2.56e-01 78.9% 64.0%
1841016 79.1.1.9 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.56 34.0 2.39e-01 85.9% 18.3%
2417913 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.56 34.0 2.15e-01 85.9% 10.9%
5035278 5.1.5.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta_propel 0.56 45.0 3.17e-01 100.0% 28.8%
5051108 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 39.0 3.18e-01 100.0% 40.0%
3805053 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.56 41.0 2.72e-01 78.9% 27.8%
5028450 331.1.1.6 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.55 34.0 3.43e-01 97.2% 60.0%
3229399 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 43.0 2.75e-01 100.0% 17.9%
1916716 5.1.4.63 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PorZ_N_b_propeller 0.55 41.0 2.75e-01 81.7% 24.3%
5005139 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.54 44.0 3.70e-01 90.1% 73.6%
3436100 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.54 40.0 2.55e-01 81.7% 48.3%
5030934 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 43.0 2.97e-01 90.1% 41.2%
3801173 4337.1.1.0 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain 0.54 44.0 3.93e-01 93.0% 87.0%
3740970 5.1.4.249 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.54 43.0 2.74e-01 100.0% 17.7%
4196623 4337.1.1.1 a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C 0.54 42.0 3.60e-01 84.5% 87.7%
5063753 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.54 45.0 4.47e-01 94.4% 90.7%
3582026 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.53 39.0 3.82e-01 80.3% 80.0%
4193845 5.1.4.279 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26550 0.52 42.0 2.69e-01 88.7% 96.7%
3286489 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.51 45.0 3.27e-01 100.0% 45.7%
3889564 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.50 37.0 2.95e-01 80.3% 44.4%
4157100 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 39.0 2.59e-01 85.9% 49.1%