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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00091
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00091
Identity
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-83_147-163
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.54 | 47.0 | 3.81e-01 | 98.0% | 70.9% |
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.54 | 23.0 | 2.47e-01 | 77.0% | 38.6% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.53 | 33.0 | 3.73e-01 | 94.0% | 83.8% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.51 | 43.0 | 3.12e-01 | 93.0% | 89.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4879294 | 2484.1.1.97 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC | 0.66 | 23.0 | 3.55e-01 | 72.0% | 78.4% |
| 3187898 | 59.1.1.8 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_beta_N | 0.65 | 34.0 | 3.25e-01 | 81.0% | 41.9% |
| 3390786 | 244.2.1.12 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › CFAP61_dimer | 0.62 | 38.0 | 3.78e-01 | 73.0% | 59.0% |
| 2066842 | 2484.1.1.97 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC | 0.60 | 23.0 | 3.53e-01 | 81.0% | 97.1% |
| 3711130 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 50.0 | 4.07e-01 | 95.0% | 91.4% |
| 4986099 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.55 | 27.0 | 3.37e-01 | 92.0% | 78.3% |
| 3962989 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.54 | 37.0 | 3.79e-01 | 72.0% | 95.0% |
| 3345244 | 5.1.8.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_1 | 0.52 | 33.0 | 2.92e-01 | 89.0% | 43.4% |
| 3338071 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.52 | 38.0 | 3.20e-01 | 91.0% | 46.7% |
| 3486799 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.51 | 34.0 | 2.81e-01 | 100.0% | 37.2% |
| 3523998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.59e-01 | 70.0% | 96.8% |
D2
medium
residues 84-146
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q2wA03 | 1.10.1840.10 | Mainly Alpha › Orthogonal Bundle › main proteinase (3clpro) structure, domain 3 › main proteinase (3clpro) structure, domain 3 | 0.61 | 46.0 | 3.82e-01 | 79.4% | 75.0% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 40.0 | 3.91e-01 | 96.8% | 66.7% |
| 1f0yA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 39.0 | 3.63e-01 | 100.0% | 55.2% |
| 1dj8A00 | 1.10.890.10 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A | 0.56 | 39.0 | 3.69e-01 | 87.3% | 59.5% |
| 2r8qA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.53 | 42.0 | 2.74e-01 | 90.5% | 55.2% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.77e-01 | 96.8% | 60.0% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.50 | 39.0 | 3.24e-01 | 88.9% | 83.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3662101 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.55 | 41.0 | 3.87e-01 | 79.4% | 86.7% |
| 3973397 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 48.0 | 3.66e-01 | 100.0% | 69.3% |
| None | — | 0.53 | 41.0 | 4.18e-01 | 95.2% | 96.7% | |
| 3947229 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.52 | 43.0 | 3.21e-01 | 98.4% | 83.7% |
| 4882533 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.50 | 36.0 | 3.07e-01 | 81.0% | 46.0% |