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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00118
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00118
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-61
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22147.2 best | AcrIC5 | 45.2 | 1.20e-11 | 91.4% | 84.9% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xdoD00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 47.0 | 2.96e-01 | 89.7% | 75.3% |
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 33.0 | 3.37e-01 | 93.1% | 54.4% |
| 1tujA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.58 | 48.0 | 3.83e-01 | 94.8% | 81.3% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 45.0 | 3.89e-01 | 91.4% | 80.0% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 43.0 | 3.59e-01 | 96.6% | 84.3% |
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 42.0 | 3.35e-01 | 100.0% | 56.8% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.51 | 39.0 | 3.31e-01 | 84.5% | 86.9% |
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.50 | 35.0 | 3.63e-01 | 74.1% | 94.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3379261 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.81 | 55.0 | 4.79e-01 | 70.7% | 50.6% |
| 3684676 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 54.0 | 4.21e-01 | 70.7% | 38.3% |
| 3595202 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 60.0 | 3.97e-01 | 91.4% | 35.0% |
| 3370997 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.64 | 46.0 | 3.41e-01 | 75.9% | 72.7% |
| 3600909 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 42.0 | 2.91e-01 | 77.6% | 61.4% |
| 3486170 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.58 | 48.0 | 4.06e-01 | 94.8% | 65.7% |
| 3587609 | 101.1.4.2 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › LacI | 0.54 | 31.0 | 3.30e-01 | 93.1% | 62.0% |