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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00119
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00119
Identity
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
Domain cluster:
rep: NODE_12_length_310542_cov_175.846709.1__X__X__00216__D74-137
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b33N01 | 3.30.1490.170 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) | 0.62 | 47.0 | 4.93e-01 | 100.0% | 94.5% |
| 3axbA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.59 | 49.0 | 3.66e-01 | 100.0% | 56.4% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.58 | 51.0 | 4.69e-01 | 100.0% | 91.5% |
| 2omlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.56 | 48.0 | 4.12e-01 | 100.0% | 86.7% |
| 1tfeA01 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.56 | 46.0 | 4.06e-01 | 96.8% | 80.4% |
| 5wpjA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.55 | 45.0 | 3.90e-01 | 96.8% | 98.1% |
| 3n01A00 | 3.30.70.2470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein-tyrosine phosphatase receptor IA-2 ectodomain | 0.55 | 45.0 | 4.09e-01 | 91.9% | 95.4% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.53e-01 | 100.0% | 93.3% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.20e-01 | 100.0% | 97.6% |
| 2kyzA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.41e-01 | 98.4% | 100.0% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.35e-01 | 100.0% | 97.2% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 3.69e-01 | 100.0% | 95.7% |
| 1mt1B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.52 | 43.0 | 3.69e-01 | 100.0% | 72.3% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.93e-01 | 100.0% | 95.7% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.52 | 39.0 | 3.47e-01 | 85.5% | 89.6% |
| 4pc3C03 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.51 | 42.0 | 4.02e-01 | 96.8% | 82.4% |
| 4paaA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 40.0 | 3.16e-01 | 100.0% | 60.6% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.71e-01 | 100.0% | 96.1% |
| 3oz2A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.50 | 40.0 | 3.18e-01 | 100.0% | 51.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944179 | 304.43.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 | 0.60 | 51.0 | 4.46e-01 | 100.0% | 96.0% |
| 1646641 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.59 | 49.0 | 4.21e-01 | 100.0% | 91.8% |
| 4965230 | 212.1.1.12 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › UPF0029 | 0.59 | 46.0 | 3.59e-01 | 85.5% | 63.7% |
| 3531239 | 304.151.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Receptor_IA-2 | 0.57 | 47.0 | 4.13e-01 | 91.9% | 87.4% |
| 4025665 | 230.3.1.0 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain | 0.57 | 46.0 | 3.61e-01 | 90.3% | 93.3% |
| 3791139 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 3.80e-01 | 93.5% | 92.5% |
| 3928272 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 3.56e-01 | 95.2% | 78.0% |
| 5067490 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.55 | 47.0 | 4.67e-01 | 100.0% | 100.0% |
| 3822570 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.55 | 46.0 | 4.33e-01 | 100.0% | 98.8% |
| 4973973 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 47.0 | 4.58e-01 | 100.0% | 97.1% |
| 5011383 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.54 | 43.0 | 4.44e-01 | 100.0% | 93.3% |
| 4888079 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.54 | 41.0 | 3.94e-01 | 100.0% | 70.3% |
| 3220394 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.54 | 45.0 | 4.08e-01 | 98.4% | 94.4% |
| 3299923 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 46.0 | 4.29e-01 | 100.0% | 95.0% |
| 5050403 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 45.0 | 4.25e-01 | 100.0% | 95.0% |
| 4239305 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.54 | 44.0 | 3.95e-01 | 96.8% | 78.9% |
| 4116356 | 304.43.1.2 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › Isocitrate_DH_C_bact | 0.54 | 46.0 | 3.92e-01 | 100.0% | 86.1% |
| 4949196 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.54 | 42.0 | 4.24e-01 | 100.0% | 91.7% |
| 3998674 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.55e-01 | 95.2% | 84.6% |
| 5007175 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.53 | 45.0 | 4.57e-01 | 100.0% | 100.0% |
| 4028163 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.53 | 44.0 | 3.46e-01 | 100.0% | 80.6% |
| 4958616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.53 | 45.0 | 4.29e-01 | 100.0% | 96.0% |
| 3713000 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 45.0 | 3.77e-01 | 96.8% | 94.5% |
| 4926952 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.53 | 44.0 | 4.30e-01 | 100.0% | 97.1% |
| 4934396 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 45.0 | 4.50e-01 | 100.0% | 100.0% |
| 4958723 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 46.0 | 4.42e-01 | 100.0% | 94.3% |
| 4944787 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 43.0 | 4.04e-01 | 100.0% | 98.8% |
| 5080144 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 43.0 | 4.24e-01 | 100.0% | 94.3% |
| 4970115 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 43.0 | 4.20e-01 | 100.0% | 97.1% |
| 4974053 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 42.0 | 4.07e-01 | 100.0% | 93.3% |
| 4973712 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 43.0 | 4.21e-01 | 100.0% | 97.1% |