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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00120
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00120
Identity
- Kingdom:
- phage
Quality
81.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-50
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ccgA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.81 | 63.0 | 4.08e-01 | 93.6% | 20.6% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 72.0 | 6.00e-01 | 100.0% | 82.7% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 69.0 | 5.90e-01 | 100.0% | 60.8% |
| 4hteA02 | 1.20.58.1740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 71.0 | 5.25e-01 | 100.0% | 52.1% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.77 | 63.0 | 4.48e-01 | 100.0% | 30.8% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.73 | 59.0 | 4.87e-01 | 89.4% | 50.0% |
| 4xaaA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.70 | 58.0 | 3.81e-01 | 97.9% | 30.3% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 55.0 | 4.63e-01 | 95.7% | 68.4% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.42e-01 | 89.4% | 67.1% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.59 | 51.0 | 4.82e-01 | 100.0% | 86.0% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 41.0 | 3.72e-01 | 85.1% | 54.4% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.55 | 44.0 | 3.13e-01 | 89.4% | 43.0% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 41.0 | 4.07e-01 | 100.0% | 88.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477418 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.86 | 70.0 | 5.48e-01 | 100.0% | 44.2% |
| 3840952 | 601.19.1.39 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C | 0.85 | 73.0 | 6.15e-01 | 100.0% | 58.7% |
| 3520738 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.79 | 67.0 | 4.58e-01 | 100.0% | 28.4% |
| 3754639 | 150.5.1.106 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C | 0.77 | 71.0 | 5.69e-01 | 100.0% | 68.2% |
| 4130073 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.74 | 60.0 | 4.60e-01 | 100.0% | 39.1% |
| 3735607 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.74 | 63.0 | 5.31e-01 | 100.0% | 57.5% |
| 3228432 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.73 | 65.0 | 6.01e-01 | 100.0% | 80.0% |
| 3417174 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.72 | 64.0 | 4.47e-01 | 100.0% | 41.7% |
| 3287986 | 605.8.1.7 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › DUF6374 | 0.70 | 59.0 | 5.84e-01 | 100.0% | 92.0% |
| 3192196 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 58.0 | 3.62e-01 | 100.0% | 18.4% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.62 | 50.0 | 4.33e-01 | 100.0% | 59.5% |
| 4000709 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.58 | 51.0 | 4.50e-01 | 100.0% | 70.0% |
| 5018187 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.57 | 46.0 | 4.28e-01 | 97.9% | 78.5% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 48.0 | 4.61e-01 | 100.0% | 85.5% |