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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00135
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00135
Identity
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-140
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tn3A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.64 | 21.0 | 3.80e-01 | 91.9% | 100.0% |
| 1vd4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 24.0 | 3.25e-01 | 96.3% | 79.0% |
| 1t9xA05 | 1.20.1640.10 | Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain | 0.51 | 44.0 | 3.76e-01 | 93.3% | 72.5% |
| 6hoyA02 | 2.20.28.200 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 19.0 | 3.06e-01 | 82.2% | 93.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4587872 | 375.1.1.270 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-DPOE | 0.55 | 22.0 | 2.39e-01 | 78.5% | 38.3% |
| 5034201 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.54 | 22.0 | 2.30e-01 | 80.0% | 36.2% |
| 4968151 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.50 | 32.0 | 3.50e-01 | 88.9% | 80.0% |
D2
medium
residues 141-197
Domain cluster:
representative