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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00145
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00145
Identity
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-48
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.74 | 68.0 | 6.12e-01 | 100.0% | 77.8% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.70 | 48.0 | 5.10e-01 | 92.7% | 88.2% |
| 2luyA01 | 3.30.60.210 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Stc1 domain | 0.67 | 52.0 | 4.81e-01 | 90.2% | 89.5% |
| 7yuiB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 48.0 | 3.85e-01 | 80.5% | 36.4% |
| 3o70A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 45.0 | 4.17e-01 | 92.7% | 63.6% |
| 5tdrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 45.0 | 3.85e-01 | 92.7% | 50.0% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 48.0 | 4.24e-01 | 97.6% | 70.3% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 47.0 | 4.42e-01 | 97.6% | 75.0% |
| 4qf3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 43.0 | 4.00e-01 | 100.0% | 64.9% |
| 3otnA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 39.0 | 2.26e-01 | 80.5% | 86.8% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.54 | 37.0 | 2.52e-01 | 73.2% | 43.8% |
| 1u8vA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.52 | 43.0 | 3.07e-01 | 97.6% | 61.5% |
| 3pw3D00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 37.0 | 2.21e-01 | 82.9% | 48.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3561303 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.89 | 67.0 | 4.31e-01 | 92.7% | 20.0% |
| 3879791 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.86 | 63.0 | 3.86e-01 | 78.0% | 14.2% |
| 3199914 | 377.1.1.22 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Stc1 | 0.84 | 63.0 | 6.44e-01 | 80.5% | 85.0% |
| 3397474 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.82 | 61.0 | 6.20e-01 | 92.7% | 82.5% |
| 3559289 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 56.0 | 4.41e-01 | 78.0% | 36.5% |
| 3957054 | 377.1.1.87 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF4193 | 0.79 | 57.0 | 6.26e-01 | 95.1% | 93.9% |
| 3788517 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.78 | 57.0 | 3.96e-01 | 80.5% | 24.6% |
| 3636201 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.77 | 56.0 | 4.03e-01 | 80.5% | 27.8% |
| 3623406 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.77 | 56.0 | 4.25e-01 | 80.5% | 33.7% |
| 3696220 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.74 | 56.0 | 4.08e-01 | 82.9% | 30.7% |
| 3837562 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.74 | 55.0 | 4.04e-01 | 85.4% | 31.4% |
| 4957868 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 52.0 | 5.56e-01 | 82.9% | 88.6% |
| 1779555 | 377.1.1.22 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Stc1 | 0.72 | 54.0 | 5.45e-01 | 92.7% | 82.9% |
| 3702126 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.71 | 51.0 | 4.13e-01 | 80.5% | 37.6% |
| 4929700 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.71 | 51.0 | 3.99e-01 | 100.0% | 35.6% |
| 4946657 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 53.0 | 4.50e-01 | 97.6% | 50.8% |
| 3715795 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 50.0 | 3.82e-01 | 80.5% | 30.5% |
| 8199 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 48.0 | 5.14e-01 | 92.7% | 90.9% |
| 4985634 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.68 | 53.0 | 4.59e-01 | 97.6% | 55.6% |
| 3472338 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 53.0 | 4.69e-01 | 97.6% | 60.0% |
| 4466003 | 376.1.3.44 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Siva | 0.65 | 49.0 | 4.31e-01 | 97.6% | 53.8% |
| 3700533 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 48.0 | 2.97e-01 | 82.9% | 12.6% |
| 3468455 | 376.1.3.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX | 0.64 | 46.0 | 4.64e-01 | 100.0% | 80.0% |
| 3751964 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.64 | 53.0 | 4.19e-01 | 97.6% | 45.9% |
| 4430351 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.62 | 44.0 | 4.06e-01 | 78.0% | 56.4% |
| 3510989 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.61 | 46.0 | 4.43e-01 | 97.6% | 72.0% |
| 2323968 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.60 | 40.0 | 4.17e-01 | 73.2% | 73.7% |
| 3410688 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.59 | 43.0 | 4.12e-01 | 80.5% | 66.0% |
| 5076714 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 3.96e-01 | 97.6% | 60.0% |
| 3566649 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.58 | 43.0 | 4.25e-01 | 92.7% | 75.6% |
| 3301385 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.58 | 40.0 | 3.16e-01 | 78.0% | 34.0% |
| 3689210 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.58 | 45.0 | 3.86e-01 | 92.7% | 52.9% |
| 3216239 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.57 | 43.0 | 3.75e-01 | 97.6% | 51.4% |
| 3656818 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.57 | 45.0 | 3.98e-01 | 97.6% | 57.1% |
| 3682221 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.56 | 46.0 | 4.24e-01 | 92.7% | 76.4% |
| 3705738 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.56 | 45.0 | 4.06e-01 | 97.6% | 63.3% |
| 3423212 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.56 | 46.0 | 3.74e-01 | 92.7% | 52.5% |
| 3522826 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.55 | 40.0 | 3.85e-01 | 92.7% | 68.0% |
| 4020148 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 42.0 | 2.60e-01 | 100.0% | 84.3% |
| 3557515 | 376.1.3.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_ash2p_like | 0.51 | 44.0 | 3.81e-01 | 97.6% | 64.6% |
| 140593 | 355.1.1.2 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI | 0.50 | 35.0 | 3.26e-01 | 87.8% | 56.1% |
D2
medium
residues 59-88
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.90 | 71.0 | 4.74e-01 | 96.7% | 24.1% |
| 1dp7P00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 68.0 | 4.97e-01 | 96.7% | 34.2% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.85 | 73.0 | 5.71e-01 | 100.0% | 51.6% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.81 | 67.0 | 5.15e-01 | 100.0% | 42.5% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.81 | 70.0 | 4.14e-01 | 100.0% | 38.9% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.77 | 60.0 | 3.89e-01 | 100.0% | 19.2% |
| 3wwhA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.73 | 62.0 | 3.98e-01 | 96.7% | 20.9% |
| 1a3gA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.72 | 59.0 | 3.90e-01 | 100.0% | 22.2% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.72 | 56.0 | 3.65e-01 | 100.0% | 48.8% |
| 1v2yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.70 | 53.0 | 3.87e-01 | 100.0% | 28.6% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.59 | 39.0 | 3.78e-01 | 86.7% | 50.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3821000 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.86 | 73.0 | 4.21e-01 | 100.0% | 12.8% |
| 4075477 | 6096.1.1.1 ↗ | a+b two layers › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › DUF3410 | 0.84 | 71.0 | 4.87e-01 | 100.0% | 27.5% |
| 3784603 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.80 | 63.0 | 3.87e-01 | 100.0% | 14.3% |