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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00168
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00168
Identity
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-142
Domain cluster:
rep: MF001358.1__ASZ76789.1__X__00123__D1-129
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n4pC00 | 3.30.420.320 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › DNA-packaging terminase, C-terminal nuclease domain | 0.61 | 54.0 | 4.68e-01 | 100.0% | 61.9% |
| 3rdkB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 53.0 | 4.04e-01 | 97.9% | 88.0% |
| 4a0gD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.91e-01 | 96.5% | 77.4% |
| 2mygA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 26.0 | 3.00e-01 | 96.5% | 61.9% |
| 2qneA01 | 3.20.20.480 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Trimethylamine methyltransferase-like | 0.53 | 46.0 | 3.24e-01 | 95.7% | 53.1% |
| 8tbxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.85e-01 | 92.2% | 78.2% |
| 4y9tA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 39.0 | 3.62e-01 | 80.1% | 76.1% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.92e-01 | 100.0% | 82.1% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 39.0 | 3.80e-01 | 80.1% | 83.0% |
| 5z5cA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 32.0 | 3.50e-01 | 70.2% | 80.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3961076 | 2484.1.1.216 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF7159 | 0.67 | 47.0 | 4.77e-01 | 100.0% | 72.9% |
| 3584695 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.55 | 44.0 | 4.60e-01 | 83.0% | 97.6% |
| 4930103 | 2004.1.1.231 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNase_J_b_CASP | 0.55 | 42.0 | 3.94e-01 | 80.1% | 94.9% |
| 4044261 | 2004.1.1.161 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N | 0.55 | 44.0 | 4.12e-01 | 86.5% | 91.1% |
| 3595196 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 47.0 | 3.12e-01 | 98.6% | 40.2% |
| 1736253 | 2485.1.1.3 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glutaredoxin | 0.54 | 26.0 | 3.00e-01 | 96.5% | 61.9% |
| 3408886 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 47.0 | 3.30e-01 | 96.5% | 52.7% |
| 3598268 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 39.0 | 3.81e-01 | 78.0% | 98.1% |
| 3177371 | 2003.1.5.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 | 0.50 | 38.0 | 3.51e-01 | 79.4% | 74.1% |