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H18_Tanzania_scaffold_0_prodigal-single.1__X__X__00204
Bact-VirH18_Tanzania_scaffold_0_prodigal-single.1__X__X__00204
Identity
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-95
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00154__D110-209_271-284
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.58 | 31.0 | 2.99e-01 | 78.9% | 42.3% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.55 | 26.0 | 3.24e-01 | 75.8% | 73.7% |
| 2z86D01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 39.0 | 2.77e-01 | 85.3% | 61.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1557492 | 4038.1.1.9 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › P23-45_portal_barrel | 0.61 | 44.0 | 4.27e-01 | 75.8% | 66.7% |
| 4963597 | 221.15.1.2 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase › PF26502 | 0.59 | 28.0 | 3.12e-01 | 75.8% | 54.7% |
| 3489463 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 41.0 | 2.75e-01 | 74.7% | 38.0% |
| 4978536 | 3281.1.2.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdh | 0.55 | 40.0 | 2.77e-01 | 76.8% | 68.1% |
| 3299515 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.52 | 38.0 | 3.33e-01 | 78.9% | 92.7% |
| 4999520 | 2008.1.1.44 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FokI_cleav_dom | 0.52 | 40.0 | 3.32e-01 | 83.2% | 95.3% |