←Back to structures
H1c1_full_scaffold_271_prodigal-single.1__X__X__00095
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00095
Identity
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-178_280-310
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00579.32 best | tRNA-synt_1b | 150.9 | 7.10e-44 | 87.1% | 63.4% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2el7B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.97 | 95.0 | 9.10e-01 | 100.0% | 96.9% |
| 1yi8B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.95 | 93.0 | 9.09e-01 | 100.0% | 96.3% |
| 3u1vA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.95 | 93.0 | 9.06e-01 | 100.0% | 97.2% |
| 6ncrB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.94 | 92.0 | 8.63e-01 | 100.0% | 91.8% |
| 2yy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.94 | 92.0 | 8.95e-01 | 100.0% | 95.3% |
| 1j1uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.87 | 69.0 | 7.10e-01 | 84.7% | 84.2% |
| 2cycA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.86 | 71.0 | 6.81e-01 | 84.7% | 84.1% |
| 3a04A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.86 | 71.0 | 6.52e-01 | 84.7% | 70.1% |
| 1n3lA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.85 | 70.0 | 6.97e-01 | 84.7% | 84.7% |
| 1qrsA05 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.85 | 51.0 | 6.59e-01 | 84.7% | 99.2% |
| 1y42X01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 69.0 | 6.22e-01 | 84.7% | 77.9% |
| 3focA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 69.0 | 6.00e-01 | 84.7% | 70.4% |
| 1r6uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.83 | 69.0 | 6.24e-01 | 84.7% | 70.5% |
| 1h3fA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 64.0 | 6.58e-01 | 84.7% | 83.6% |
| 3p0hB02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 64.0 | 5.57e-01 | 87.1% | 75.5% |
| 3n8hA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.75 | 55.0 | 5.93e-01 | 84.7% | 86.4% |
| 1ufvA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 54.0 | 5.88e-01 | 84.7% | 88.4% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 58.0 | 5.49e-01 | 84.2% | 99.2% |
| 1kamA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 40.0 | 4.29e-01 | 84.7% | 67.8% |
| 1puiA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 31.0 | 3.39e-01 | 96.0% | 52.7% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 29.0 | 3.35e-01 | 93.1% | 57.0% |
| 3ab8A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 43.0 | 3.95e-01 | 84.7% | 53.6% |
| 1uanA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.63 | 46.0 | 4.50e-01 | 84.7% | 69.1% |
| 4ymiB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 44.0 | 4.52e-01 | 84.7% | 77.3% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 44.0 | 4.46e-01 | 84.7% | 75.4% |
| 1wehA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 39.0 | 4.19e-01 | 84.7% | 79.4% |
| 1ydhA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 38.0 | 3.99e-01 | 84.7% | 72.3% |
| 1t35E00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 37.0 | 3.89e-01 | 84.7% | 72.7% |
| 1kjnA00 | 3.40.50.10160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like | 0.55 | 38.0 | 4.27e-01 | 84.7% | 91.4% |
| 4mixA00 | 3.90.550.20 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.55 | 45.0 | 4.04e-01 | 84.7% | 88.0% |
| 1gs5A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 44.0 | 4.09e-01 | 84.7% | 91.5% |
| 4kp7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 35.0 | 3.91e-01 | 84.7% | 81.9% |
| 1k4kB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 41.0 | 4.16e-01 | 84.7% | 78.9% |
| 2c4kA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 31.0 | 3.43e-01 | 98.5% | 68.9% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.53 | 35.0 | 3.72e-01 | 84.7% | 75.0% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 42.0 | 3.50e-01 | 84.7% | 97.7% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 35.0 | 4.04e-01 | 74.8% | 95.8% |
| 4i1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 30.0 | 3.74e-01 | 78.7% | 95.7% |
| 3oy2A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 35.0 | 3.34e-01 | 84.7% | 59.1% |
| 3oyzA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 41.0 | 3.74e-01 | 84.2% | 95.5% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4037949 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.98 | 96.0 | 7.81e-01 | 100.0% | 97.3% |
| 4357984 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.98 | 96.0 | 7.76e-01 | 100.0% | 97.6% |
| 4198332 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.98 | 96.0 | 7.63e-01 | 100.0% | 98.3% |
| 3651640 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.97 | 95.0 | 7.53e-01 | 100.0% | 93.1% |
| 4001700 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.97 | 95.0 | 7.36e-01 | 100.0% | 85.5% |
| 4671800 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.97 | 95.0 | 7.65e-01 | 100.0% | 96.5% |
| 4664989 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 95.0 | 7.65e-01 | 100.0% | 97.0% |
| 3724289 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 94.0 | 7.33e-01 | 100.0% | 92.6% |
| 4469624 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 94.0 | 7.52e-01 | 100.0% | 93.1% |
| 3469964 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 94.0 | 7.60e-01 | 100.0% | 96.8% |
| 3785473 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 94.0 | 7.45e-01 | 100.0% | 94.4% |
| 2126485 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.95 | 93.0 | 7.67e-01 | 100.0% | 98.4% |
| 387721 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 91.0 | 7.59e-01 | 100.0% | 98.4% |
| 4264395 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 91.0 | 7.37e-01 | 100.0% | 94.8% |
| 4029688 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.92 | 90.0 | 6.60e-01 | 100.0% | 96.7% |
| 4979586 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 73.0 | 5.78e-01 | 86.6% | 86.8% |
| 5079552 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 72.0 | 5.61e-01 | 85.6% | 88.3% |
| 4133327 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 76.0 | 5.95e-01 | 91.1% | 84.7% |
| 5053430 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 75.0 | 5.98e-01 | 89.6% | 82.8% |
| 5012077 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.85 | 71.0 | 5.67e-01 | 85.1% | 85.6% |
| 4967192 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.85 | 70.0 | 5.83e-01 | 84.7% | 56.0% |
| 5001337 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.85 | 72.0 | 5.72e-01 | 87.1% | 81.1% |
| 4013546 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.85 | 71.0 | 5.82e-01 | 86.6% | 89.1% |
| 4061943 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 70.0 | 5.74e-01 | 85.6% | 87.1% |
| 4064994 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 70.0 | 5.81e-01 | 85.6% | 86.0% |
| 4275453 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 69.0 | 5.75e-01 | 84.7% | 57.2% |
| 3973572 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.84 | 69.0 | 5.84e-01 | 84.7% | 58.7% |
| 4408360 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 69.0 | 5.75e-01 | 84.7% | 56.9% |
| 4241086 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.83 | 69.0 | 5.59e-01 | 84.7% | 53.3% |
| 3722941 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.83 | 71.0 | 5.72e-01 | 87.6% | 88.3% |
| 3465691 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.82 | 68.0 | 5.56e-01 | 85.6% | 88.5% |
| 2140850 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.82 | 67.0 | 6.61e-01 | 84.7% | 83.5% |
| 3997952 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.81 | 68.0 | 5.61e-01 | 85.6% | 87.1% |
| 5059731 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.81 | 49.0 | 5.79e-01 | 84.7% | 84.1% |
| 1174411 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.79 | 63.0 | 6.76e-01 | 83.2% | 94.9% |
| 3233553 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.78 | 65.0 | 5.23e-01 | 87.1% | 82.5% |
| 4413280 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.75 | 45.0 | 5.21e-01 | 84.7% | 80.0% |
| 5027240 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.75 | 61.0 | 4.53e-01 | 84.7% | 54.0% |
| 4945212 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.75 | 61.0 | 5.75e-01 | 83.7% | 100.0% |
| 4932556 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.71 | 58.0 | 5.05e-01 | 84.7% | 92.2% |
| 4475588 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.71 | 44.0 | 5.41e-01 | 84.7% | 96.2% |
| 4957334 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.71 | 43.0 | 5.48e-01 | 83.7% | 99.2% |
| 4010166 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 42.0 | 4.85e-01 | 84.7% | 84.1% |
| 3386991 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.65 | 45.0 | 4.81e-01 | 84.7% | 78.9% |
| 5050889 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.63 | 41.0 | 4.88e-01 | 84.2% | 99.2% |
| 3207702 | 2005.1.1.67 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28717 | 0.59 | 51.0 | 4.90e-01 | 91.1% | 95.1% |
| 3524530 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.58 | 33.0 | 3.63e-01 | 82.2% | 64.7% |
| 4605339 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 35.0 | 4.05e-01 | 84.7% | 82.1% |
| 4242923 | 7510.1.1.3 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis | 0.57 | 38.0 | 4.21e-01 | 84.7% | 84.4% |
| 4346434 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.56 | 37.0 | 4.42e-01 | 97.0% | 98.6% |
| 4160184 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.55 | 45.0 | 4.63e-01 | 85.1% | 91.1% |
| 4597796 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.54 | 37.0 | 4.25e-01 | 95.5% | 95.9% |
| 4158059 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.54 | 44.0 | 4.35e-01 | 85.6% | 94.0% |
| 4015682 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 38.0 | 3.34e-01 | 84.7% | 48.2% |
| 3365939 | 7512.1.1.63 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1+GT-B_Sucrose_synth | 0.53 | 37.0 | 3.56e-01 | 84.7% | 61.7% |
| 5049739 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 39.0 | 3.99e-01 | 96.0% | 80.0% |
| 3926777 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.50 | 34.0 | 3.74e-01 | 79.7% | 83.6% |
D2
high
residues 198-278
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i6kA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.92 | 87.0 | 7.67e-01 | 100.0% | 81.1% |
| 2yy5A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.90 | 85.0 | 7.29e-01 | 100.0% | 83.2% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.88 | 82.0 | 7.31e-01 | 100.0% | 81.1% |
| 3a04A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.86 | 80.0 | 7.01e-01 | 100.0% | 83.6% |
| 6ncrA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.84 | 78.0 | 7.01e-01 | 100.0% | 85.2% |
| 3tzeA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.82 | 76.0 | 6.85e-01 | 100.0% | 83.3% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 36.0 | 3.88e-01 | 100.0% | 65.7% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 36.0 | 3.05e-01 | 100.0% | 33.8% |
| 3dkaB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.62 | 50.0 | 4.30e-01 | 90.1% | 68.9% |
| 1d0cA03 | 3.90.1230.10 | Alpha Beta › Alpha-Beta Complex › Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3 › Nitric Oxide Synthase; Chain A, domain 3 | 0.62 | 47.0 | 4.56e-01 | 95.1% | 74.2% |
| 2ntxA01 | 1.20.58.2010 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 | 0.60 | 41.0 | 3.02e-01 | 70.4% | 53.8% |
| 3tixA02 | 6.10.140.1690 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 36.0 | 3.73e-01 | 91.4% | 63.3% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.58 | 46.0 | 3.14e-01 | 87.7% | 77.9% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 37.0 | 3.90e-01 | 70.4% | 71.2% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 35.0 | 3.54e-01 | 100.0% | 59.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.56 | 39.0 | 3.82e-01 | 93.8% | 64.8% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 37.0 | 4.10e-01 | 95.1% | 88.9% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.54 | 42.0 | 4.17e-01 | 85.2% | 96.5% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 42.0 | 3.56e-01 | 85.2% | 87.1% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 42.0 | 4.00e-01 | 100.0% | 74.2% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 43.0 | 3.33e-01 | 98.8% | 68.9% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 45.0 | 4.06e-01 | 100.0% | 70.4% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.51 | 44.0 | 3.54e-01 | 98.8% | 87.3% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 35.0 | 3.29e-01 | 72.8% | 96.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3803972 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 53.0 | 5.63e-01 | 88.9% | 90.0% |
| 5050997 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.65 | 56.0 | 4.89e-01 | 96.3% | 98.4% |
| 3690723 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.65 | 39.0 | 3.41e-01 | 97.5% | 39.2% |
| 4958850 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.64 | 39.0 | 3.68e-01 | 93.8% | 50.5% |
| 4025263 | 6055.1.1.35 ↗ | extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › RIFIN | 0.59 | 50.0 | 3.83e-01 | 100.0% | 40.0% |
| 4474891 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.58 | 51.0 | 3.50e-01 | 98.8% | 41.4% |
| 4011575 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 3.94e-01 | 100.0% | 64.3% |
| 3591358 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 45.0 | 3.39e-01 | 92.6% | 55.9% |
| 3711079 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.55 | 46.0 | 3.33e-01 | 93.8% | 46.1% |
| 3994805 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.54 | 43.0 | 3.98e-01 | 90.1% | 92.7% |
| 3173897 | 130.1.1.46 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PF30540 | 0.53 | 35.0 | 3.05e-01 | 87.7% | 44.0% |
| 3625454 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.53 | 43.0 | 3.96e-01 | 91.4% | 93.6% |
| 3798489 | 164.1.1.0 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II | 0.52 | 39.0 | 3.56e-01 | 95.1% | 59.1% |
| 3593195 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.52 | 42.0 | 4.14e-01 | 88.9% | 85.9% |
| 3781172 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.52 | 40.0 | 2.65e-01 | 87.7% | 21.5% |
| 3335914 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 45.0 | 2.79e-01 | 100.0% | 56.7% |
| 4535381 | 101.1.2.603 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 | 0.51 | 40.0 | 3.00e-01 | 88.9% | 37.8% |
| 3724336 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.50 | 40.0 | 2.99e-01 | 91.4% | 60.0% |