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H1c1_full_scaffold_271_prodigal-single.1__X__X__00121
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00121
Identity
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-89
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.87 | 64.0 | 5.45e-01 | 78.4% | 51.9% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 62.0 | 4.02e-01 | 84.3% | 21.8% |
| 5c9gA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.74 | 54.0 | 5.23e-01 | 78.4% | 78.9% |
| 2vx2G02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.69 | 50.0 | 4.88e-01 | 76.5% | 78.2% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.68 | 49.0 | 3.23e-01 | 78.4% | 49.6% |
| 3mzlB02 | 6.10.140.1600 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 47.0 | 4.67e-01 | 100.0% | 73.2% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 52.0 | 3.49e-01 | 98.0% | 24.6% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.56 | 42.0 | 3.27e-01 | 90.2% | 87.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3725506 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.84 | 62.0 | 4.73e-01 | 78.4% | 39.1% |
| 3735607 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.82 | 60.0 | 5.17e-01 | 78.4% | 52.5% |
| 4401282 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.78 | 57.0 | 4.36e-01 | 78.4% | 37.4% |
| 3399076 | 150.1.1.94 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Sas10_Utp3 | 0.73 | 53.0 | 4.06e-01 | 78.4% | 33.3% |
| 4854384 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.66 | 46.0 | 3.79e-01 | 76.5% | 39.6% |
| 3742136 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 48.0 | 4.31e-01 | 82.4% | 56.0% |
| 3586848 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.62 | 51.0 | 3.93e-01 | 92.2% | 68.7% |
| 5063952 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.54 | 42.0 | 2.79e-01 | 94.1% | 31.2% |
| 4046684 | 101.1.3.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Spo0A_C | 0.51 | 44.0 | 3.91e-01 | 100.0% | 68.0% |