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H1c1_full_scaffold_271_prodigal-single.1__X__X__00149
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00149
Identity
- Kingdom:
- phage
Quality
96.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.61 | 42.0 | 4.16e-01 | 97.0% | 67.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 47.0 | 4.53e-01 | 89.4% | 85.5% |
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.57 | 46.0 | 4.29e-01 | 92.4% | 94.1% |
| 4uy9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 3.65e-01 | 80.3% | 93.3% |
| 4qy7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.73e-01 | 83.3% | 78.2% |
| 6lbtA01 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.28e-01 | 87.9% | 75.4% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.52 | 42.0 | 3.62e-01 | 87.9% | 79.2% |
| 5u81A01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.51 | 44.0 | 3.01e-01 | 100.0% | 88.0% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 37.0 | 3.64e-01 | 77.3% | 100.0% |
| 1v4pC01 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.50 | 41.0 | 3.48e-01 | 89.4% | 76.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964427 | 304.132.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 0.69 | 51.0 | 4.04e-01 | 80.3% | 99.3% |
| 3470234 | 11.1.6.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA | 0.56 | 47.0 | 3.74e-01 | 98.5% | 91.0% |
| 3253597 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.55 | 47.0 | 3.46e-01 | 100.0% | 95.4% |
| 195783 | 2.23.1.1 ↗ | beta barrels › OB-fold › Hypothetical protein yobA › Hypothetical protein yobA › DUF3221 | 0.54 | 39.0 | 3.45e-01 | 80.3% | 75.0% |
| 4400357 | 312.1.1.21 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf, DUF4922 | 0.52 | 40.0 | 2.97e-01 | 81.8% | 37.1% |
| 3977606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.60e-01 | 86.4% | 73.0% |
| 3997189 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.52 | 42.0 | 3.92e-01 | 89.4% | 80.0% |
| 4339411 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 43.0 | 2.94e-01 | 100.0% | 40.3% |
| 4965843 | 2.4.1.19 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › DUF7861 | 0.52 | 40.0 | 3.62e-01 | 86.4% | 80.9% |
| 4043601 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.52 | 40.0 | 4.09e-01 | 86.4% | 86.2% |
| 4316388 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.51 | 39.0 | 3.10e-01 | 86.4% | 93.3% |
| 4030635 | 1.1.7.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 | 0.50 | 39.0 | 2.71e-01 | 87.9% | 77.2% |
| 4558677 | 2.4.1.7 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK | 0.50 | 39.0 | 3.10e-01 | 89.4% | 75.5% |
| 4128954 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.50 | 37.0 | 3.69e-01 | 84.8% | 77.1% |