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H1c1_full_scaffold_271_prodigal-single.1__X__X__00233
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00233
Identity
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 33-103
Domain cluster:
representative
D2
medium
residues 104-154
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5h9cA00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.92 | 86.0 | 7.27e-01 | 100.0% | 71.8% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.78 | 66.0 | 5.83e-01 | 96.1% | 90.8% |
| 4m6rA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.77 | 54.0 | 3.40e-01 | 72.5% | 81.2% |
| 1hcyA02 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.75 | 57.0 | 3.66e-01 | 82.4% | 82.5% |
| 6v0kA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.71 | 65.0 | 3.94e-01 | 100.0% | 17.2% |
| 7utzR02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.71 | 62.0 | 3.90e-01 | 100.0% | 51.6% |
| 2iufA02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.57 | 41.0 | 3.32e-01 | 76.5% | 44.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945237 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.94 | 65.0 | 3.72e-01 | 72.5% | 8.8% |
| 5045163 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.87 | 79.0 | 4.73e-01 | 100.0% | 20.6% |
| 3734862 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.85 | 60.0 | 3.41e-01 | 78.4% | 8.4% |
| 3291916 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.82 | 72.0 | 4.37e-01 | 100.0% | 17.8% |
| 3645589 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.81 | 71.0 | 5.37e-01 | 100.0% | 45.5% |
| 3720325 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.81 | 70.0 | 4.56e-01 | 100.0% | 23.3% |
| 3627844 | 3331.1.1.8 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 | 0.79 | 74.0 | 5.26e-01 | 98.0% | 52.3% |
| 3580409 | 3826.1.1.26 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RRP36 | 0.79 | 74.0 | 5.20e-01 | 98.0% | 50.4% |
| 3575022 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.78 | 61.0 | 4.85e-01 | 84.3% | 51.0% |