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H1c1_full_scaffold_271_prodigal-single.1__X__X__00252
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00252
Identity
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-91
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 55.0 | 5.73e-01 | 98.3% | 70.9% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 56.0 | 5.41e-01 | 71.2% | 69.7% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 56.0 | 5.76e-01 | 100.0% | 82.1% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 53.0 | 4.73e-01 | 100.0% | 51.8% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 50.0 | 5.51e-01 | 98.3% | 93.2% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 54.0 | 4.90e-01 | 100.0% | 57.5% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 5.06e-01 | 93.2% | 72.1% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.28e-01 | 98.3% | 74.6% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.02e-01 | 86.4% | 66.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 5.16e-01 | 89.8% | 73.8% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 53.0 | 3.37e-01 | 94.9% | 18.4% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.70 | 51.0 | 3.96e-01 | 78.0% | 64.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.13e-01 | 88.1% | 75.0% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.38e-01 | 100.0% | 88.9% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 5.21e-01 | 96.6% | 81.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 5.32e-01 | 100.0% | 87.3% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 5.59e-01 | 100.0% | 89.7% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 5.29e-01 | 100.0% | 77.6% |
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 50.0 | 5.25e-01 | 100.0% | 92.3% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 47.0 | 4.01e-01 | 74.6% | 50.5% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 53.0 | 3.63e-01 | 100.0% | 25.2% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.95e-01 | 100.0% | 72.2% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 54.0 | 5.51e-01 | 100.0% | 92.9% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 52.0 | 4.36e-01 | 88.1% | 50.5% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.81e-01 | 100.0% | 68.4% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 5.06e-01 | 100.0% | 82.5% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 4.53e-01 | 100.0% | 71.6% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.49e-01 | 100.0% | 65.1% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.34e-01 | 100.0% | 59.8% |
| 1sfeA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.42e-01 | 100.0% | 64.3% |
| 3lsgA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 45.0 | 4.81e-01 | 96.6% | 100.0% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.59 | 49.0 | 3.79e-01 | 100.0% | 41.2% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 47.0 | 4.22e-01 | 88.1% | 85.4% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.57 | 47.0 | 4.42e-01 | 100.0% | 74.0% |
| 3h2zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 48.0 | 3.50e-01 | 100.0% | 93.8% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 3.46e-01 | 100.0% | 36.5% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 44.0 | 3.77e-01 | 98.3% | 69.2% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 4.36e-01 | 100.0% | 83.3% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 40.0 | 3.87e-01 | 84.7% | 94.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.92e-01 | 100.0% | 82.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5074438 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 56.0 | 6.70e-01 | 96.6% | 97.5% |
| 3964284 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 59.0 | 5.87e-01 | 100.0% | 71.7% |
| 5070906 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 61.0 | 6.06e-01 | 79.7% | 90.0% |
| 3567273 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.77 | 50.0 | 5.58e-01 | 98.3% | 88.9% |
| 3984815 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.76 | 57.0 | 5.92e-01 | 100.0% | 85.5% |
| 3988145 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.76 | 55.0 | 5.83e-01 | 83.1% | 90.0% |
| 5045749 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.74 | 50.0 | 4.84e-01 | 100.0% | 63.1% |
| 4965520 | 101.1.1.556 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 | 0.74 | 51.0 | 5.28e-01 | 98.3% | 76.4% |
| 3410592 | 101.1.8.25 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq | 0.74 | 49.0 | 5.11e-01 | 100.0% | 74.5% |
| 3476699 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.74 | 68.0 | 5.94e-01 | 100.0% | 75.3% |
| 5052578 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.74 | 46.0 | 5.33e-01 | 91.5% | 95.0% |
| 5062514 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.73 | 50.0 | 5.48e-01 | 98.3% | 93.3% |
| 4939690 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.73 | 66.0 | 5.52e-01 | 100.0% | 69.0% |
| 3279330 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.73 | 51.0 | 4.76e-01 | 74.6% | 69.3% |
| 4932316 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.73 | 66.0 | 5.47e-01 | 100.0% | 67.0% |
| 3588657 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.73 | 54.0 | 5.75e-01 | 100.0% | 94.0% |
| 4987329 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.73 | 49.0 | 4.38e-01 | 100.0% | 49.4% |
| 4583223 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.73 | 53.0 | 5.44e-01 | 96.6% | 81.8% |
| 4944887 | 101.1.1.546 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ThiN | 0.72 | 54.0 | 4.24e-01 | 79.7% | 40.0% |
| 4937291 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.72 | 49.0 | 5.33e-01 | 98.3% | 93.3% |
| 5028174 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.72 | 48.0 | 4.94e-01 | 96.6% | 74.5% |
| 4654073 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.71 | 48.0 | 4.51e-01 | 98.3% | 56.0% |
| 5014241 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.71 | 48.0 | 4.32e-01 | 98.3% | 49.4% |
| 4966880 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.71 | 49.0 | 4.16e-01 | 98.3% | 44.2% |
| 4626289 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.71 | 51.0 | 4.93e-01 | 100.0% | 69.2% |
| 4992556 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.70 | 48.0 | 3.98e-01 | 98.3% | 40.0% |
| 5045632 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.70 | 46.0 | 4.96e-01 | 91.5% | 80.0% |
| 4993165 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.70 | 48.0 | 4.09e-01 | 98.3% | 44.2% |
| 3239905 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.69 | 51.0 | 4.57e-01 | 100.0% | 55.3% |
| 5009656 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 50.0 | 4.86e-01 | 100.0% | 69.2% |
| 4970237 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.69 | 48.0 | 5.27e-01 | 100.0% | 95.6% |
| 4008147 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.68 | 52.0 | 5.07e-01 | 100.0% | 75.4% |
| 4530329 | 101.1.8.14 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 | 0.68 | 46.0 | 4.59e-01 | 98.3% | 70.0% |
| 4950777 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.68 | 46.0 | 4.38e-01 | 98.3% | 60.0% |
| 4950688 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.67 | 56.0 | 4.69e-01 | 94.9% | 54.0% |
| 3945377 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.67 | 54.0 | 5.27e-01 | 100.0% | 80.0% |
| 3962552 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.66 | 53.0 | 4.93e-01 | 100.0% | 69.3% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.66 | 53.0 | 5.32e-01 | 100.0% | 86.7% |
| 2332937 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.65 | 52.0 | 4.85e-01 | 100.0% | 70.3% |
| 3958970 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.65 | 49.0 | 4.49e-01 | 100.0% | 61.3% |
| 3610395 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.63 | 51.0 | 4.05e-01 | 100.0% | 45.2% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 52.0 | 4.40e-01 | 91.5% | 64.2% |
| 3961692 | 101.1.1.300 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 | 0.62 | 47.0 | 4.07e-01 | 100.0% | 51.6% |
| 3981688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.61 | 51.0 | 5.00e-01 | 100.0% | 86.2% |
| 4967888 | 101.1.7.1 ↗ | alpha arrays › HTH › HTH › Methylated DNA-protein cysteine methyltransferase-C › DNA_binding_1 | 0.60 | 47.0 | 4.64e-01 | 100.0% | 81.5% |
| 3286659 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.60 | 53.0 | 5.04e-01 | 100.0% | 82.9% |
| 4102570 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 42.0 | 4.47e-01 | 100.0% | 92.0% |
| 3979732 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 43.0 | 4.25e-01 | 100.0% | 80.0% |
| 3453253 | 509.1.1.9 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 | 0.54 | 38.0 | 3.36e-01 | 100.0% | 47.4% |
| 4934737 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.53 | 42.0 | 3.89e-01 | 100.0% | 68.8% |
| 4021233 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.52 | 44.0 | 2.76e-01 | 100.0% | 20.6% |
| 3743165 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 45.0 | 3.55e-01 | 100.0% | 91.2% |
| 3956134 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 41.0 | 4.22e-01 | 100.0% | 100.0% |