←Back to structures
H1c1_full_scaffold_271_prodigal-single.1__X__X__00282
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00282
Identity
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-81
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hz7A05 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.70 | 61.0 | 4.86e-01 | 100.0% | 93.8% |
| 2qckA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 50.0 | 3.83e-01 | 79.4% | 67.5% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 48.0 | 3.60e-01 | 79.4% | 63.4% |
| 1qtqA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.64 | 55.0 | 4.71e-01 | 100.0% | 93.5% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 47.0 | 3.85e-01 | 81.0% | 89.1% |
| 2ra9A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.59 | 42.0 | 4.56e-01 | 76.2% | 100.0% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.58 | 48.0 | 4.41e-01 | 92.1% | 88.1% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 3.12e-01 | 73.0% | 60.4% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.11e-01 | 74.6% | 80.6% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 49.0 | 3.70e-01 | 100.0% | 73.9% |
| 3gldA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.26e-01 | 81.0% | 91.6% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 49.0 | 3.73e-01 | 100.0% | 71.1% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.56 | 48.0 | 4.29e-01 | 98.4% | 85.9% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.55 | 43.0 | 3.70e-01 | 88.9% | 82.6% |
| 4hfqA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 47.0 | 3.72e-01 | 100.0% | 65.5% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 48.0 | 3.60e-01 | 100.0% | 71.4% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 39.0 | 3.31e-01 | 77.8% | 81.2% |
| 4kyxA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 46.0 | 3.69e-01 | 100.0% | 69.8% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.54 | 44.0 | 3.84e-01 | 95.2% | 62.3% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.54 | 40.0 | 3.07e-01 | 84.1% | 68.9% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 47.0 | 3.54e-01 | 100.0% | 71.2% |
| 2re3A01 | 3.10.540.10 | Alpha Beta › Roll › duf1285 like fold › duf1285 like domain | 0.53 | 37.0 | 3.42e-01 | 74.6% | 66.3% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 44.0 | 3.98e-01 | 95.2% | 81.6% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 46.0 | 2.97e-01 | 100.0% | 49.4% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.52 | 42.0 | 3.72e-01 | 93.7% | 87.0% |
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 42.0 | 3.41e-01 | 100.0% | 66.0% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.51 | 41.0 | 3.56e-01 | 90.5% | 93.1% |
| 1rwiA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 38.0 | 2.58e-01 | 82.5% | 29.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4048207 | 6012.1.1.0 ↗ | few secondary structure elements › Antimicrobial peptide LCI › Antimicrobial peptide LCI › Antimicrobial peptide LCI | 0.68 | 44.0 | 5.13e-01 | 71.4% | 97.7% |
| 4512371 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.67 | 49.0 | 3.67e-01 | 77.8% | 63.7% |
| 4671888 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.62 | 50.0 | 3.40e-01 | 92.1% | 70.4% |
| 3895174 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.60 | 45.0 | 2.82e-01 | 81.0% | 32.8% |
| 3917309 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.60 | 45.0 | 2.84e-01 | 81.0% | 34.4% |
| 4995639 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.57 | 48.0 | 4.49e-01 | 95.2% | 91.3% |
| 3550995 | 58.1.1.1 ↗ | beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 | 0.56 | 46.0 | 4.04e-01 | 95.2% | 66.0% |
| 5036400 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 40.0 | 3.87e-01 | 77.8% | 91.4% |
| 4012450 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.52 | 38.0 | 2.88e-01 | 82.5% | 62.2% |
| 5081944 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 43.0 | 3.53e-01 | 100.0% | 70.4% |
| 3848539 | 58.1.1.1 ↗ | beta barrels › Oncogene product-like › Oncogene products › Oncogene products › TCL1_MTCP1 | 0.52 | 44.0 | 3.62e-01 | 95.2% | 62.6% |
| 3798312 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 35.0 | 3.44e-01 | 73.0% | 97.1% |
| 3163708 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.51 | 42.0 | 3.57e-01 | 100.0% | 94.2% |
| 3959560 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.51 | 43.0 | 3.69e-01 | 100.0% | 63.6% |
| 3263885 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.50 | 41.0 | 2.70e-01 | 100.0% | 83.7% |
| 3968188 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.50 | 42.0 | 3.42e-01 | 100.0% | 68.1% |