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H1c1_full_scaffold_271_prodigal-single.1__X__X__00334
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00334
Identity
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 85-177
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 30.0 | 3.01e-01 | 87.1% | 52.1% |
| 1kf6B02 | 1.10.1060.10 | Mainly Alpha › Orthogonal Bundle › Fumarate Reductase Iron-sulfur Protein; Chain B, domain 2 › Alpha-helical ferredoxin | 0.51 | 44.0 | 3.96e-01 | 100.0% | 96.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052864 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.55 | 46.0 | 3.96e-01 | 90.3% | 60.7% |
| 3937971 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.52 | 45.0 | 3.38e-01 | 100.0% | 70.0% |
| 5066119 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 3.15e-01 | 100.0% | 29.7% |
| 4950616 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.51 | 41.0 | 3.16e-01 | 88.2% | 91.6% |
| 4486192 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.50 | 38.0 | 3.46e-01 | 79.6% | 63.4% |
| 1108030 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.50 | 40.0 | 3.33e-01 | 87.1% | 52.1% |