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H1c1_full_scaffold_271_prodigal-single.1__X__X__00385
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00385
Identity
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-69
Domain cluster:
rep: CG_2015-01t_scaffold_8_prodigal-single.1__X__X__00219__D4-42
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m01A02 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.67 | 56.0 | 4.59e-01 | 97.5% | 97.4% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 55.0 | 3.92e-01 | 100.0% | 99.3% |
| 3i57A01 | 3.10.20.470 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 55.0 | 4.64e-01 | 100.0% | 94.7% |
| 1bmlC03 | 3.10.20.150 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 55.0 | 4.47e-01 | 100.0% | 91.6% |
| 3hhmA03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.66 | 54.0 | 3.83e-01 | 100.0% | 70.2% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 53.0 | 4.01e-01 | 100.0% | 79.4% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 52.0 | 4.03e-01 | 100.0% | 96.9% |
| 1j0gA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 51.0 | 4.03e-01 | 100.0% | 80.4% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 51.0 | 3.94e-01 | 100.0% | 96.9% |
| 5f1cA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.60 | 50.0 | 3.04e-01 | 97.5% | 23.6% |
| 4ekuA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 48.0 | 3.60e-01 | 100.0% | 80.3% |
| 2bs2B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.59 | 51.0 | 3.75e-01 | 100.0% | 84.9% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.58 | 49.0 | 3.81e-01 | 100.0% | 84.2% |
| 2ekiA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.58 | 49.0 | 3.81e-01 | 100.0% | 79.6% |
| 5zwlE01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.58 | 48.0 | 3.87e-01 | 100.0% | 87.5% |
| 2e5yA01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.57 | 47.0 | 3.78e-01 | 100.0% | 87.5% |
| 2wzpR03 | 3.30.1920.20 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Phage tail base-plate attachment protein, domain D3 | 0.57 | 48.0 | 3.95e-01 | 100.0% | 68.8% |
| 1vjkA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.57 | 48.0 | 3.83e-01 | 100.0% | 95.4% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.57 | 47.0 | 3.52e-01 | 100.0% | 67.8% |
| 2dzmA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 48.0 | 4.03e-01 | 100.0% | 97.2% |
| 4bfrB02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 44.0 | 3.29e-01 | 100.0% | 65.6% |
| 7pcrA02 | 3.10.20.580 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 48.0 | 3.64e-01 | 97.5% | 92.6% |
| 4p16A01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.55 | 45.0 | 4.16e-01 | 97.5% | 94.6% |
| 5mpoB00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.55 | 45.0 | 3.65e-01 | 100.0% | 92.9% |
| 2xssA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 42.0 | 3.04e-01 | 100.0% | 30.1% |
| 2g3wA00 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.54 | 46.0 | 3.03e-01 | 100.0% | 82.7% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 44.0 | 3.68e-01 | 100.0% | 97.3% |
| 7bi2A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 39.0 | 3.13e-01 | 100.0% | 72.9% |
| 4melA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.28e-01 | 100.0% | 84.0% |
| 4nurA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.51 | 44.0 | 3.09e-01 | 100.0% | 31.3% |
| 2ylmA03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 37.0 | 3.13e-01 | 100.0% | 89.7% |
| 4m0wA01 | 3.10.20.540 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Papain-like viral protease, N-terminal domain | 0.50 | 39.0 | 3.67e-01 | 100.0% | 96.4% |
| 1x1mA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 36.0 | 3.01e-01 | 100.0% | 80.4% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3183075 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 57.0 | 4.45e-01 | 100.0% | 95.7% |
| 1299250 | 3114.1.1.0 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain | 0.67 | 58.0 | 4.63e-01 | 100.0% | 93.8% |
| 3111925 | 3114.1.1.2 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP_2 | 0.67 | 58.0 | 4.66e-01 | 100.0% | 86.3% |
| 3745675 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.64 | 54.0 | 4.03e-01 | 100.0% | 86.4% |
| 4027791 | 221.1.1.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX | 0.64 | 55.0 | 4.37e-01 | 100.0% | 94.1% |
| 3487190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.63 | 53.0 | 4.14e-01 | 100.0% | 94.7% |
| 3587124 | 3114.1.1.1 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP | 0.63 | 50.0 | 4.45e-01 | 97.5% | 95.4% |
| 3451982 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 53.0 | 4.13e-01 | 100.0% | 93.3% |
| 5045915 | 221.1.1.35 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Urm1 | 0.61 | 54.0 | 4.13e-01 | 100.0% | 94.4% |
| 4477848 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.61 | 51.0 | 3.83e-01 | 100.0% | 88.2% |
| 3490042 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 49.0 | 3.84e-01 | 100.0% | 90.0% |
| 3705542 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 52.0 | 4.09e-01 | 100.0% | 95.3% |
| 3702630 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 50.0 | 3.95e-01 | 100.0% | 82.2% |
| 3708857 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 49.0 | 3.78e-01 | 100.0% | 94.3% |
| 5055117 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.59 | 51.0 | 3.92e-01 | 100.0% | 93.7% |
| 3397596 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 48.0 | 3.60e-01 | 100.0% | 93.3% |
| 5042742 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.59 | 50.0 | 3.98e-01 | 100.0% | 98.8% |
| 4997730 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 51.0 | 3.92e-01 | 100.0% | 93.3% |
| 4991872 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 50.0 | 4.11e-01 | 100.0% | 100.0% |
| 3783859 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.58 | 45.0 | 3.43e-01 | 100.0% | 72.9% |
| 4626943 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.58 | 49.0 | 3.74e-01 | 100.0% | 87.0% |
| 3995034 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 47.0 | 3.94e-01 | 100.0% | 93.8% |
| 5025556 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 49.0 | 4.05e-01 | 100.0% | 98.7% |
| 4322781 | 3292.1.1.1 ↗ | a+b complex topology › Adenine deaminase 2 C-terminal domain › Adenine deaminase 2 C-terminal domain › Adenine deaminase 2 C-terminal domain › Adenine_deam_C | 0.57 | 46.0 | 3.04e-01 | 100.0% | 41.0% |
| 4549715 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 48.0 | 3.82e-01 | 100.0% | 96.5% |
| 5072079 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 48.0 | 3.78e-01 | 100.0% | 97.8% |
| 3225756 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.56 | 46.0 | 3.17e-01 | 100.0% | 89.1% |
| 3605971 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 47.0 | 3.48e-01 | 97.5% | 56.4% |
| 3476726 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 38.0 | 3.01e-01 | 75.0% | 52.6% |
| 3166586 | 3470.1.1.43 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › PF29527 | 0.56 | 45.0 | 4.28e-01 | 97.5% | 82.0% |
| 5052367 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.56 | 47.0 | 3.62e-01 | 100.0% | 94.7% |
| 3969515 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 48.0 | 3.16e-01 | 100.0% | 83.9% |
| 5045861 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 43.0 | 2.69e-01 | 100.0% | 25.6% |
| 3821272 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.55 | 46.0 | 3.82e-01 | 100.0% | 100.0% |
| 3957937 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.54 | 46.0 | 3.66e-01 | 100.0% | 47.1% |
| 3386156 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.54 | 46.0 | 3.47e-01 | 100.0% | 85.6% |
| 4358536 | 4987.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 | 0.54 | 36.0 | 3.10e-01 | 100.0% | 38.6% |
| 4377857 | 2003.1.1.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ApbA | 0.54 | 42.0 | 2.81e-01 | 97.5% | 26.5% |
| 4952653 | 212.1.1.60 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Nre_N | 0.53 | 39.0 | 2.57e-01 | 95.0% | 40.0% |
| 3285613 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.53 | 45.0 | 2.98e-01 | 100.0% | 84.6% |
| 3991059 | 221.1.1.72 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TECR_N | 0.53 | 44.0 | 3.44e-01 | 100.0% | 82.1% |
| 3600905 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.53 | 42.0 | 3.43e-01 | 100.0% | 52.2% |
| 5011116 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.53 | 44.0 | 3.62e-01 | 100.0% | 97.5% |
| 4401973 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.52 | 36.0 | 3.08e-01 | 92.5% | 39.2% |
| 4026591 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 40.0 | 3.51e-01 | 100.0% | 89.3% |
| 3687587 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 40.0 | 3.24e-01 | 100.0% | 95.0% |
| 3980575 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.52 | 42.0 | 3.65e-01 | 100.0% | 61.4% |
| 119371 | 3071.1.1.2 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Prophage_tail | 0.52 | 43.0 | 3.78e-01 | 100.0% | 64.1% |
| 4020138 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 36.0 | 2.59e-01 | 87.5% | 63.0% |
| 3785367 | 221.1.1.31 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › NLE | 0.51 | 41.0 | 3.15e-01 | 100.0% | 78.3% |