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H1c1_full_scaffold_271_prodigal-single.1__X__X__00396
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00396
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-146
Domain cluster:
rep: OP542242.1__UYB98459.1__X__00061__D6-146
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.63 | 35.0 | 4.30e-01 | 87.9% | 86.4% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 38.0 | 4.10e-01 | 92.2% | 71.9% |
| 2pn5A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 28.0 | 3.20e-01 | 75.9% | 60.0% |
| 4eq3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 28.0 | 3.09e-01 | 75.9% | 55.6% |
| 5jtwA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 26.0 | 3.04e-01 | 75.9% | 57.8% |
| 8bxrA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 26.0 | 3.10e-01 | 75.9% | 64.4% |
| 5utkA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 23.0 | 2.83e-01 | 75.2% | 61.4% |
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.52 | 35.0 | 3.25e-01 | 97.2% | 52.4% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.51 | 22.0 | 2.98e-01 | 73.0% | 78.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990637 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 30.0 | 3.85e-01 | 70.9% | 74.7% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 30.0 | 4.01e-01 | 73.0% | 84.0% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.63 | 29.0 | 4.19e-01 | 73.0% | 95.3% |
| 3467170 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.62 | 28.0 | 4.05e-01 | 71.6% | 95.2% |
| 3901691 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 26.0 | 3.10e-01 | 75.2% | 53.1% |
| 5046219 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 29.0 | 3.24e-01 | 75.9% | 57.3% |
| 3227513 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.59 | 38.0 | 4.34e-01 | 95.7% | 87.6% |
| 3923857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 28.0 | 3.24e-01 | 76.6% | 61.9% |
| 3899239 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.55 | 33.0 | 3.85e-01 | 90.8% | 90.0% |
| 5039639 | 11.14.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › AglB_L1 | 0.54 | 29.0 | 3.40e-01 | 76.6% | 73.7% |
| 3274047 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.53 | 36.0 | 4.16e-01 | 94.3% | 96.0% |
| 3230319 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 30.0 | 3.73e-01 | 91.5% | 93.8% |
| 4353917 | 382.1.1.10 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PLA2_inh | 0.53 | 31.0 | 3.66e-01 | 92.2% | 84.2% |
| 3965010 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.53 | 33.0 | 3.99e-01 | 75.9% | 96.7% |
| 5043357 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 26.0 | 2.99e-01 | 76.6% | 60.0% |
| 3478866 | 4135.1.1.0 ↗ | beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like | 0.51 | 37.0 | 3.59e-01 | 75.2% | 84.4% |
| 5031647 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 26.0 | 3.60e-01 | 77.3% | 100.0% |