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H1c1_full_scaffold_271_prodigal-single.1__X__X__00403
Bact-VirH1c1_full_scaffold_271_prodigal-single.1__X__X__00403
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-142
Domain cluster:
rep: MN497415.1__QGH73801.1__X__00010__D3-143
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 34.0 | 4.77e-01 | 93.4% | 95.4% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 29.0 | 4.26e-01 | 71.5% | 91.9% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 28.0 | 3.87e-01 | 86.1% | 82.1% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 35.0 | 4.41e-01 | 94.2% | 96.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 29.0 | 4.16e-01 | 73.7% | 100.0% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.58 | 23.0 | 3.37e-01 | 74.5% | 82.5% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 32.0 | 3.95e-01 | 94.2% | 89.0% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 32.0 | 4.11e-01 | 78.1% | 100.0% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 37.0 | 4.43e-01 | 71.5% | 98.9% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 34.0 | 3.67e-01 | 93.4% | 70.7% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 29.0 | 3.86e-01 | 74.5% | 97.2% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 28.0 | 3.80e-01 | 71.5% | 98.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 28.0 | 3.74e-01 | 75.2% | 97.2% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.51 | 24.0 | 3.36e-01 | 96.4% | 98.3% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 28.0 | 3.57e-01 | 100.0% | 98.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4149372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 30.0 | 4.30e-01 | 75.2% | 86.2% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 29.0 | 4.26e-01 | 71.5% | 92.3% |
| 4315771 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.65 | 29.0 | 4.13e-01 | 76.6% | 89.2% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.64 | 29.0 | 4.04e-01 | 76.6% | 87.9% |
| 3741680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 26.0 | 3.97e-01 | 71.5% | 96.4% |
| 3941152 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 28.0 | 4.07e-01 | 74.5% | 92.3% |
| 3987614 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 34.0 | 4.24e-01 | 74.5% | 92.5% |
| 4212372 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 34.0 | 4.24e-01 | 93.4% | 93.8% |
| 4886624 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 34.0 | 4.16e-01 | 92.7% | 91.3% |
| 4204456 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 34.0 | 4.22e-01 | 93.4% | 93.8% |
| 5047563 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 34.0 | 4.32e-01 | 72.3% | 100.0% |
| 4194126 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 33.0 | 4.17e-01 | 93.4% | 92.5% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.59 | 28.0 | 3.97e-01 | 72.3% | 95.3% |
| 4584501 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 33.0 | 4.14e-01 | 73.7% | 92.5% |
| 4085660 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 33.0 | 4.19e-01 | 74.5% | 93.8% |
| 4305633 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 32.0 | 4.03e-01 | 92.0% | 90.0% |
| 4183023 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 32.0 | 4.05e-01 | 93.4% | 91.3% |
| 4038686 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 34.0 | 4.12e-01 | 92.7% | 90.6% |
| 4396747 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 4.02e-01 | 73.7% | 91.3% |
| 4209293 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 4.06e-01 | 94.2% | 91.3% |
| 3408678 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.58 | 35.0 | 3.92e-01 | 73.0% | 77.1% |
| 4277745 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 4.02e-01 | 93.4% | 91.3% |
| 4082776 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 4.00e-01 | 93.4% | 91.3% |
| 4200438 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 4.00e-01 | 73.0% | 91.3% |
| 4347147 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 32.0 | 3.96e-01 | 93.4% | 90.0% |
| 4215942 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.58 | 33.0 | 4.04e-01 | 92.7% | 89.4% |
| 4245059 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 32.0 | 3.89e-01 | 93.4% | 87.1% |
| 4141240 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 33.0 | 4.13e-01 | 76.6% | 96.2% |
| 4070256 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 32.0 | 3.97e-01 | 93.4% | 92.5% |
| 4061669 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 32.0 | 3.91e-01 | 73.7% | 91.3% |
| 4425417 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 32.0 | 3.97e-01 | 93.4% | 92.5% |
| 4285193 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.57 | 33.0 | 4.16e-01 | 93.4% | 97.5% |
| 3953289 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.56 | 32.0 | 3.84e-01 | 73.7% | 87.1% |
| 4105153 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.56 | 32.0 | 3.86e-01 | 93.4% | 87.1% |
| 4262785 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.56 | 32.0 | 3.94e-01 | 73.7% | 93.8% |
| 4221404 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 31.0 | 3.84e-01 | 73.7% | 91.3% |
| 4193291 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 32.0 | 3.84e-01 | 75.9% | 86.7% |
| 4072975 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 31.0 | 3.84e-01 | 74.5% | 92.5% |
| 4683474 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 31.0 | 3.91e-01 | 93.4% | 93.8% |
| 4240811 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.55 | 31.0 | 3.81e-01 | 93.4% | 89.4% |
| 4952930 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.55 | 32.0 | 3.93e-01 | 76.6% | 92.9% |
| 5071208 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.54 | 39.0 | 4.37e-01 | 73.7% | 96.2% |
| 3673266 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 29.0 | 3.55e-01 | 83.2% | 82.4% |
| 3233743 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 33.0 | 3.77e-01 | 93.4% | 83.0% |
| 5000724 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 36.0 | 4.25e-01 | 96.4% | 100.0% |
| 4426103 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.53 | 30.0 | 3.73e-01 | 93.4% | 92.5% |
| 4272096 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.53 | 33.0 | 4.03e-01 | 71.5% | 96.7% |
| 4270702 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.52 | 30.0 | 3.65e-01 | 94.2% | 92.5% |
| 3991293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 25.0 | 2.69e-01 | 93.4% | 51.2% |
| 3965166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 33.0 | 3.91e-01 | 93.4% | 100.0% |
D2
medium
residues 145-237
D3
medium
residues 238-298