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H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00161
Bact-VirH2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00161
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-152
D2
medium
residues 153-234
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.85 | 67.0 | 4.28e-01 | 95.1% | 20.2% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.80 | 70.0 | 4.52e-01 | 100.0% | 22.3% |
| 3ww7A00 | 2.40.10.500 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.79 | 64.0 | 6.40e-01 | 97.6% | 86.6% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.77 | 70.0 | 4.44e-01 | 100.0% | 32.1% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.76 | 45.0 | 4.05e-01 | 91.5% | 43.0% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 68.0 | 4.29e-01 | 100.0% | 25.5% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.73 | 66.0 | 4.40e-01 | 100.0% | 27.1% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.73 | 66.0 | 4.30e-01 | 100.0% | 24.2% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.72 | 65.0 | 4.32e-01 | 100.0% | 25.5% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.71 | 63.0 | 4.13e-01 | 100.0% | 24.1% |
| 3v9fA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 65.0 | 4.28e-01 | 100.0% | 26.4% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.70 | 42.0 | 3.76e-01 | 89.0% | 43.2% |
| 1gmeA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 51.0 | 4.10e-01 | 76.8% | 51.3% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.68 | 61.0 | 3.98e-01 | 100.0% | 23.5% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.63 | 50.0 | 3.93e-01 | 100.0% | 39.7% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.63 | 47.0 | 4.27e-01 | 80.5% | 97.3% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.59 | 53.0 | 3.84e-01 | 98.8% | 48.2% |
| 4mmhA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 43.0 | 2.97e-01 | 78.0% | 22.7% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.58 | 53.0 | 4.17e-01 | 100.0% | 61.0% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.57 | 37.0 | 3.20e-01 | 90.2% | 40.6% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.57 | 39.0 | 3.64e-01 | 92.7% | 55.8% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.57 | 49.0 | 4.13e-01 | 96.3% | 84.3% |
| 1qmnA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 48.0 | 3.95e-01 | 93.9% | 93.6% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 44.0 | 4.04e-01 | 89.0% | 86.4% |
| 2r9yA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 46.0 | 3.80e-01 | 92.7% | 87.0% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 3.93e-01 | 91.5% | 99.2% |
| 6gitA02 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 45.0 | 3.05e-01 | 96.3% | 94.8% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.85e-01 | 95.1% | 67.4% |
| 1jrrA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 46.0 | 4.00e-01 | 93.9% | 95.9% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.53 | 41.0 | 4.23e-01 | 85.4% | 88.6% |
| 2oayA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 46.0 | 3.50e-01 | 93.9% | 88.3% |
| 2gu1A03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.52 | 43.0 | 3.62e-01 | 92.7% | 54.5% |
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.55e-01 | 87.8% | 76.8% |
| 3hx1B00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 40.0 | 3.70e-01 | 82.9% | 84.0% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.77e-01 | 91.5% | 94.3% |
| 7qrlA01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.51 | 44.0 | 3.71e-01 | 93.9% | 58.5% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.50 | 43.0 | 3.17e-01 | 97.6% | 96.1% |
| 2dh2A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 40.0 | 3.93e-01 | 86.6% | 100.0% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 42.0 | 3.90e-01 | 93.9% | 72.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611446 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.81 | 75.0 | 4.96e-01 | 100.0% | 37.1% |
| 3617123 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.80 | 69.0 | 4.21e-01 | 98.8% | 15.9% |
| 3639374 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.79 | 72.0 | 4.71e-01 | 100.0% | 25.2% |
| 3990338 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.79 | 72.0 | 4.90e-01 | 100.0% | 30.9% |
| 3729058 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.79 | 73.0 | 4.59e-01 | 100.0% | 22.1% |
| 5079117 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.78 | 72.0 | 4.83e-01 | 100.0% | 28.8% |
| 3706025 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.78 | 70.0 | 4.55e-01 | 100.0% | 23.9% |
| 3896807 | 5.1.4.235 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st | 0.78 | 70.0 | 4.38e-01 | 97.6% | 19.8% |
| 3905749 | 5.1.5.105 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st | 0.78 | 70.0 | 4.38e-01 | 97.6% | 20.0% |
| 3672600 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.77 | 67.0 | 4.36e-01 | 97.6% | 22.6% |
| 3376278 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.77 | 70.0 | 4.59e-01 | 100.0% | 26.2% |
| 3926989 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.76 | 68.0 | 4.40e-01 | 100.0% | 23.2% |
| 3173290 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.76 | 68.0 | 4.32e-01 | 98.8% | 28.5% |
| None | — | 0.75 | 67.0 | 4.42e-01 | 100.0% | 25.1% | |
| 3785172 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.75 | 68.0 | 4.46e-01 | 100.0% | 26.2% |
| 3831607 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.75 | 68.0 | 4.51e-01 | 100.0% | 26.7% |
| 3407108 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.75 | 68.0 | 4.35e-01 | 100.0% | 22.2% |
| 3695223 | 5.1.4.515 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF26607 | 0.75 | 67.0 | 4.36e-01 | 100.0% | 26.8% |
| 3582457 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.75 | 67.0 | 4.42e-01 | 100.0% | 25.6% |
| 3334724 | 5.1.3.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth | 0.75 | 68.0 | 4.43e-01 | 100.0% | 27.5% |
| 3597898 | 5.1.11.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd | 0.75 | 68.0 | 3.87e-01 | 100.0% | 10.2% |
| 3906313 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.75 | 67.0 | 4.31e-01 | 100.0% | 25.1% |
| 5079413 | 5.1.3.272 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP | 0.74 | 68.0 | 4.67e-01 | 100.0% | 34.3% |
| 3831822 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.74 | 67.0 | 3.82e-01 | 100.0% | 10.8% |
| 4995431 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.74 | 63.0 | 4.06e-01 | 100.0% | 20.8% |
| 3269369 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.74 | 67.0 | 4.22e-01 | 100.0% | 21.7% |
| 3318785 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 64.0 | 4.14e-01 | 100.0% | 21.4% |
| 3440037 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 66.0 | 4.17e-01 | 100.0% | 20.9% |
| 3391005 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 66.0 | 4.34e-01 | 100.0% | 26.8% |
| 3607433 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 66.0 | 4.08e-01 | 100.0% | 20.4% |
| 3437699 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.72 | 64.0 | 4.59e-01 | 100.0% | 47.9% |
| 3990350 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.71 | 65.0 | 4.29e-01 | 100.0% | 29.2% |
| 3908602 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.71 | 64.0 | 4.12e-01 | 100.0% | 22.6% |
| 3309356 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.71 | 64.0 | 4.11e-01 | 100.0% | 21.6% |
| 3440368 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.69 | 61.0 | 4.01e-01 | 98.8% | 28.7% |
| 3459220 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.69 | 60.0 | 4.05e-01 | 100.0% | 34.2% |
| 2800366 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.68 | 61.0 | 4.03e-01 | 100.0% | 24.0% |
| 3928054 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 59.0 | 4.17e-01 | 100.0% | 32.5% |
| 1890046 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.66 | 58.0 | 4.47e-01 | 98.8% | 44.9% |
| 3252048 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.64 | 50.0 | 4.25e-01 | 82.9% | 65.9% |
| 3817897 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.63 | 53.0 | 4.46e-01 | 93.9% | 89.7% |
| 4944430 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.63 | 44.0 | 4.45e-01 | 100.0% | 73.8% |
| 3545608 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.63 | 56.0 | 3.63e-01 | 100.0% | 35.7% |
| 3518515 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.61 | 53.0 | 3.18e-01 | 96.3% | 21.0% |
| 5079018 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 45.0 | 4.49e-01 | 86.6% | 76.5% |
| 4974435 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 48.0 | 4.56e-01 | 86.6% | 85.3% |
| 3174465 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 49.0 | 4.47e-01 | 91.5% | 88.2% |
| 4020163 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.58 | 46.0 | 3.82e-01 | 86.6% | 84.0% |
| 3278065 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.58 | 49.0 | 4.44e-01 | 100.0% | 69.1% |
| 4560456 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.58 | 51.0 | 4.28e-01 | 97.6% | 83.6% |
| 3931445 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.58 | 50.0 | 3.82e-01 | 98.8% | 42.4% |
| 3501831 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 49.0 | 3.76e-01 | 100.0% | 42.9% |
| 3298483 | 5.3.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin | 0.56 | 49.0 | 4.19e-01 | 100.0% | 80.7% |
| 3742045 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.56 | 49.0 | 4.23e-01 | 97.6% | 70.8% |
| 5043373 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 41.0 | 3.66e-01 | 81.7% | 61.7% |
| 3584298 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 43.0 | 3.30e-01 | 86.6% | 58.4% |
| 5025494 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 45.0 | 3.64e-01 | 98.8% | 49.4% |
| 4998413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 35.0 | 3.73e-01 | 78.0% | 78.6% |
| 328471 | 220.1.1.63 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NF1 | 0.52 | 40.0 | 3.69e-01 | 89.0% | 79.5% |
| 3598106 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.74e-01 | 91.5% | 100.0% |
D3
medium
residues 235-408