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H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00216
Bact-VirH2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00216
Identity
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-119
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p5aC00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 43.0 | 3.42e-01 | 87.3% | 40.8% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 29.0 | 3.22e-01 | 79.1% | 65.9% |
| 1a9xA06 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 32.0 | 2.59e-01 | 75.5% | 32.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034929 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.64 | 37.0 | 3.01e-01 | 86.4% | 29.0% |
| 2647290 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.59 | 32.0 | 3.71e-01 | 75.5% | 72.5% |
| 3588583 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 31.0 | 2.85e-01 | 74.5% | 39.3% |
| 3357113 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.53 | 35.0 | 3.08e-01 | 97.3% | 43.6% |
| 3995459 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.53 | 40.0 | 3.18e-01 | 81.8% | 88.5% |
| 3981224 | 5084.5.1.22 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF3971 | 0.52 | 35.0 | 2.52e-01 | 70.0% | 22.8% |
| 3604446 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.52 | 44.0 | 2.81e-01 | 94.5% | 99.2% |
| 4623391 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.52 | 42.0 | 3.61e-01 | 85.5% | 86.5% |
| 3403944 | 210.1.1.2 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome,Proteasome_A_N | 0.51 | 37.0 | 2.91e-01 | 75.5% | 84.0% |
| 4027252 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 45.0 | 3.26e-01 | 98.2% | 76.3% |