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H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00354
Bact-VirH2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00354
Identity
- Kingdom:
- phage
Quality
93.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-78
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ejrA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.71 | 46.0 | 4.22e-01 | 73.0% | 51.2% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 44.0 | 3.93e-01 | 73.0% | 47.7% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.66 | 51.0 | 3.28e-01 | 85.7% | 54.5% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 50.0 | 3.05e-01 | 87.3% | 65.3% |
| 6az1g01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 47.0 | 3.07e-01 | 81.0% | 49.8% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 42.0 | 3.76e-01 | 73.0% | 47.8% |
| 6hxiA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.61 | 42.0 | 2.94e-01 | 71.4% | 52.3% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 2.94e-01 | 100.0% | 50.7% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 38.0 | 3.09e-01 | 76.2% | 56.4% |
| 7kcgA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 38.0 | 3.02e-01 | 76.2% | 60.2% |
| 2djhA00 | 3.30.2310.30 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) | 0.53 | 37.0 | 3.26e-01 | 73.0% | 56.2% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 35.0 | 2.89e-01 | 71.4% | 95.7% |
| 6i18A04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 35.0 | 3.05e-01 | 74.6% | 58.9% |
| 3ii7A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.50 | 37.0 | 2.48e-01 | 81.0% | 43.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3655121 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.68 | 53.0 | 3.16e-01 | 85.7% | 52.1% |
| 3772065 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.66 | 43.0 | 3.56e-01 | 74.6% | 36.5% |
| 3255946 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 41.0 | 3.88e-01 | 73.0% | 50.0% |
| 3175705 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 52.0 | 3.26e-01 | 93.7% | 62.2% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.63 | 53.0 | 3.22e-01 | 95.2% | 54.0% |
| 3347231 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.63 | 47.0 | 3.74e-01 | 81.0% | 70.0% |
| 3499167 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 47.0 | 3.00e-01 | 84.1% | 44.6% |
| 3559550 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.62 | 51.0 | 3.06e-01 | 92.1% | 39.6% |
| 3779483 | 5.1.4.136 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ig_3 | 0.62 | 51.0 | 3.06e-01 | 93.7% | 39.0% |
| 3523834 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.62 | 47.0 | 2.98e-01 | 85.7% | 50.4% |
| 3703426 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 42.0 | 2.70e-01 | 71.4% | 36.7% |
| 3314585 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.60 | 45.0 | 3.06e-01 | 82.5% | 58.9% |
| 3274430 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.58 | 40.0 | 2.82e-01 | 73.0% | 65.2% |
| 3208203 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.58 | 39.0 | 4.13e-01 | 88.9% | 81.8% |
| 3709449 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 44.0 | 2.92e-01 | 85.7% | 49.8% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.57 | 39.0 | 4.12e-01 | 87.3% | 81.8% |
| 3607522 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.57 | 38.0 | 3.89e-01 | 77.8% | 73.3% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.56 | 37.0 | 3.91e-01 | 79.4% | 78.2% |
| 3383223 | 375.1.1.53 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Nudix_N_2 | 0.56 | 39.0 | 4.13e-01 | 84.1% | 85.5% |
| 3958770 | 10.1.1.40 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Arabino_trans_N | 0.55 | 39.0 | 3.55e-01 | 77.8% | 53.3% |
| 3262703 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 35.0 | 3.83e-01 | 76.2% | 82.0% |
| 3900683 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.53 | 38.0 | 3.05e-01 | 77.8% | 51.1% |
| 3929033 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.51 | 40.0 | 3.72e-01 | 87.3% | 76.2% |
| 5010014 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.50 | 36.0 | 2.59e-01 | 74.6% | 55.6% |