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H2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00395
Bact-VirH2c1_full_idba_ud_scaffold_88_prodigal-single.1__X__X__00395
Identity
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-120
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.74 | 61.0 | 4.36e-01 | 86.3% | 67.3% |
| 2pokA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 39.0 | 3.04e-01 | 78.6% | 81.2% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.53 | 43.0 | 3.93e-01 | 87.2% | 87.3% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 44.0 | 3.91e-01 | 93.2% | 97.7% |
| 2z84A00 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 43.0 | 3.62e-01 | 91.5% | 94.3% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 30.0 | 3.35e-01 | 80.3% | 72.2% |
| 1cg2A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 41.0 | 3.16e-01 | 87.2% | 99.3% |
| 3oqcA02 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.51 | 42.0 | 3.53e-01 | 91.5% | 93.4% |
| 4mmoA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 38.0 | 2.97e-01 | 79.5% | 82.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3828345 | 219.1.1.91 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 | 0.72 | 57.0 | 4.48e-01 | 83.8% | 62.6% |
| 3375823 | 219.1.1.91 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › EDR1 | 0.70 | 57.0 | 4.65e-01 | 86.3% | 57.1% |
| 3685551 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.66 | 55.0 | 4.59e-01 | 89.7% | 77.5% |
| 5064595 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.61 | 56.0 | 4.52e-01 | 99.1% | 73.6% |
| 4937019 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.59 | 39.0 | 4.35e-01 | 88.0% | 88.9% |
| 3668551 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.55 | 40.0 | 2.99e-01 | 75.2% | 79.9% |
| 3939992 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 37.0 | 3.86e-01 | 70.1% | 89.1% |
| 4937094 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.54 | 39.0 | 4.18e-01 | 88.9% | 88.0% |
| 4985379 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.53 | 42.0 | 4.08e-01 | 87.2% | 84.3% |
| 4929875 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.53 | 35.0 | 3.74e-01 | 82.1% | 78.0% |
| 3493244 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 43.0 | 3.18e-01 | 92.3% | 54.2% |
| 4992018 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.51 | 41.0 | 3.19e-01 | 86.3% | 98.1% |
| 3278093 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.51 | 42.0 | 3.24e-01 | 89.7% | 52.0% |
| 4365971 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 35.0 | 3.40e-01 | 72.6% | 100.0% |
| 3800985 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 42.0 | 3.52e-01 | 91.5% | 93.8% |