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HC-PRO
Euk-VirYam_mild_mosaic_virus
HC-PRO__YP_007001285__Yam_mild_mosaic_virus__87097
Identity
- Accession:
- YP_007001285 ↗
- Protein ID:
- HC-PRO
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Yam_mild_mosaic_virus
TaxID: 87097
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-106
Domain cluster:
rep: HC-Pro__YP_009252411__Tobacco_mosqueado_virus__1792583__D31-64_66-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 26.1 | 5.90e-06 | 100.0% | 16.6% |
D2
medium
residues 112-177
Domain cluster:
rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 41.6 | 1.20e-10 | 98.5% | 13.9% |
D3
medium
residues 181-268_327-339
Domain cluster:
rep: HC-Pro__YP_001936179__Verbena_virus_Y__515446__D186-209_223-267_313-337
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 56.9 | 2.60e-15 | 95.0% | 17.3% |
D4
medium
residues 269-326_340-457
Domain cluster:
rep: HC-Pro_protein__YP_006590094__Chinese_yam_necrotic_mosaic_virus__128818__D95-261
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 219.4 | 1.30e-64 | 100.0% | 41.6% |