HC-Pro

Euk-Vir

Verbena_virus_Y

HC-Pro__YP_001936179__Verbena_virus_Y__515446

Identity

86.8 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Verbena_virus_Y

TaxID: 515446

View cluster (80 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 29-104

PDB

Domain cluster: rep: HC-Pro__YP_009252411__Tobacco_mosqueado_virus__1792583__D31-64_66-104

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00851.25 best	Peptidase_C6	50.8	1.80e-13	100.0%	16.1%

D2 medium residues 111-177

PDB

Domain cluster: rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00851.25 best	Peptidase_C6	58.3	9.60e-16	100.0%	14.5%

D3 medium residues 186-209_223-267_313-337

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00851.25 best	Peptidase_C6	35.4	8.90e-09	75.5%	17.7%

D4 medium residues 210-222_268-312_338-456

PDB

Domain cluster: rep: HC-Pro_protein__YP_006590094__Chinese_yam_necrotic_mosaic_virus__128818__D95-261

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00851.25 best	Peptidase_C6	204.1	5.50e-60	67.8%	27.1%
PF00851.25	Peptidase_C6	45.1	9.70e-12	32.8%	9.6%