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HC-Pro
Euk-VirFreesia_mosaic_virus
HC-Pro__YP_003587810__Freesia_mosaic_virus__421012
Identity
- Accession:
- YP_003587810 ↗
- Protein ID:
- HC-Pro
- Kingdom:
- euk
Quality
82.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Freesia_mosaic_virus
TaxID: 421012
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-105
Domain cluster:
rep: HC-Pro__YP_009252411__Tobacco_mosqueado_virus__1792583__D31-64_66-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 25.1 | 1.20e-05 | 100.0% | 16.6% |
D2
high
residues 111-175
Domain cluster:
rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165
D3
medium
residues 176-198_268-311_338-455
Domain cluster:
rep: HC-Pro_protein__YP_006590094__Chinese_yam_necrotic_mosaic_virus__128818__D95-261
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00851.25 best | Peptidase_C6 | 176.8 | 1.10e-51 | 64.9% | 27.1% |
D4
medium
residues 199-267_312-337
Domain cluster:
rep: HC-Pro__YP_001936179__Verbena_virus_Y__515446__D186-209_223-267_313-337