HC-Pro

Euk-Vir

Zucchini_shoestring_virus

HC-Pro__YP_009667091__Zucchini_shoestring_virus__1679239

Identity

83.7 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Zucchini_shoestring_virus

TaxID: 1679239

View cluster (80 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 209-456

PDB

Domain cluster: rep: HC-Pro__YP_851200__Blackberry_virus_Y__323118__D78-324

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00851.25 best	Peptidase_C6	296.7	4.60e-88	100.0%	57.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tahA02	1.10.287.1770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.54	19.0	3.02e-01	94.8%	81.8%
1szhA01	1.10.150.360	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.54	18.0	3.11e-01	76.6%	100.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3427839	103.2.1.0 ↗	alpha arrays › RuvA-C › ATP cone › ATP cone	0.56	21.0	3.59e-01	85.9%	100.0%
3455739	181.1.1.0 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins	0.55	22.0	3.47e-01	87.1%	97.8%

D2 medium residues 31-106

PDB

Domain cluster: rep: HC-Pro_segment__YP_008992246__Zucchini_tigre_mosaic_virus__1406816__D31-111

D3 medium residues 112-177

PDB

Domain cluster: rep: HC-Pro_protein__YP_006405405__Basella_rugose_mosaic_virus__373398__D110-165